Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.1e-70 270.0 157 100.0
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 3.2e-65 251.9 157 83.4
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 3.9e-63 245.0 157 92.4
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.1e-61 239.2 157 79.0
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 3.4e-59 231.9 158 78.5
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 7.6e-59 230.7 158 79.1
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 1.3e-58 229.9 158 78.5
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 1.3e-58 229.9 158 78.5
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.7e-58 229.6 158 78.5
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 2.2e-58 229.2 158 78.5
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 6.3e-53 211.1 178 66.9
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 6.5e-50 201.1 131 80.2
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 2.4e-44 182.6 153 63.4
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 8.8e-39 164.1 161 56.5
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.3e-37 160.2 161 55.3
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.2e-35 153.7 161 55.3
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 2.0e-35 152.9 131 61.1
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 5.9e-35 151.4 131 59.5
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 5.9e-35 151.4 131 59.5
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.3e-34 150.2 153 54.9
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 2.2e-34 149.4 131 62.6
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 2.9e-34 149.1 131 63.4
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 3.8e-34 148.7 131 62.6
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 3.8e-34 148.7 131 59.5
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 6.5e-34 147.9 127 64.6
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 8.5e-34 147.5 131 61.8
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.5e-33 146.7 123 61.0
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 2.5e-33 146.0 131 60.3
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 2.5e-33 146.0 132 59.1
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 3.2e-33 145.6 131 58.8
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.2e-33 145.2 131 58.8
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 5.5e-33 144.8 131 58.0
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 9.4e-33 144.1 131 58.8
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 9.4e-33 144.1 131 58.0
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 1.2e-32 143.7 132 57.6
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.6e-32 143.3 130 59.2
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 2.1e-32 142.9 132 58.3
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.7e-32 142.5 132 58.3
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.6e-32 142.1 132 57.6
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 6.1e-32 141.4 132 57.6
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 8.0e-32 141.0 133 60.2
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 8.0e-32 141.0 132 56.8
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.0e-31 140.6 118 64.4
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.8e-31 139.8 132 56.8
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.8e-31 139.8 132 58.3
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 3.0e-31 139.0 120 60.8
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 6.7e-31 137.9 132 57.6
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 8.8e-31 137.5 135 56.3
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 8.8e-31 137.5 131 55.7
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 2.0e-30 136.3 127 58.3
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 2.6e-30 136.0 132 55.3
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 3.3e-30 135.6 131 56.5
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 5.7e-30 134.8 124 57.3
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 5.7e-30 134.8 132 55.3
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.3e-29 133.7 131 55.7
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.3e-29 133.7 131 55.7
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 2.2e-29 132.9 188 45.2
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.2e-29 132.9 132 53.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 3.7e-29 132.1 155 49.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 6.3e-29 131.3 124 55.6
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.4e-28 130.2 161 50.3
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.6e-27 126.7 155 49.0
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 2.7e-27 125.9 132 54.5
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.0e-26 124.0 132 53.0
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.3e-26 123.6 137 51.8
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 3.8e-26 122.1 131 51.9
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 6.5e-26 121.3 131 50.4
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 6.5e-26 121.3 130 56.9
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 6.5e-26 121.3 122 54.1
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 1.9e-25 119.8 123 49.6
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 2.5e-25 119.4 131 51.9
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 4.2e-25 118.6 131 48.9
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.2e-24 117.1 161 45.3
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 1.6e-24 116.7 120 55.8
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 2.1e-24 116.3 128 53.1
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 3.6e-24 115.5 160 46.9
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.0e-23 114.0 192 40.1
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.4e-23 113.6 115 53.9
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.4e-23 113.6 108 55.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.4e-23 113.6 123 50.4
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.8e-23 113.2 131 51.1
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.8e-23 113.2 156 48.1
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.8e-23 113.2 105 58.1
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.3e-23 112.8 134 51.5
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 5.2e-23 111.7 153 46.4
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 5.2e-23 111.7 130 49.2
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 8.8e-23 110.9 142 45.1
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 8.8e-23 110.9 131 49.6
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 9.8e-22 107.5 162 48.1
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 4.1e-20 102.1 122 46.7
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 4.1e-20 102.1 131 45.8
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 7.0e-20 101.3 120 53.3
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.2e-19 100.5 112 50.0
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 2.0e-19 99.8 134 47.8
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 2.7e-19 99.4 124 45.2
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 3.5e-19 99.0 122 45.9
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 5.9e-19 98.2 132 46.2
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 5.9e-19 98.2 132 46.2
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.3e-18 97.1 101 54.5
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.9e-18 95.9 100 46.0
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.1e-17 94.0 114 48.2
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.5e-17 93.6 86 61.6
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 6.1e-16 88.2 104 47.1
CARHR144210 Cardamine hirsuta HOM05D005827 ORTHO05D005864 8.0e-16 87.8 52 88.5
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.0e-15 87.4 142 43.7
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 8.9e-15 84.3 78 51.3
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 4.4e-14 82.0 89 47.2
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.7e-14 81.6 76 57.9
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.8e-13 79.3 78 55.1
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 3.7e-13 79.0 105 45.7
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 4.9e-13 78.6 91 52.7
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 6.3e-13 78.2 88 48.9
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 6.3e-13 78.2 89 55.1
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 8.3e-13 77.8 82 53.7
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.1e-12 77.4 107 44.9
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 2.4e-12 76.3 90 52.2
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 5.4e-12 75.1 90 52.2
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 9.2e-12 74.3 79 51.9
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 1.2e-11 73.9 105 43.8
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 1.6e-11 73.6 89 52.8
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 2.0e-11 73.2 69 49.3
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 7.8e-11 71.2 90 51.1
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.3e-10 69.7 81 50.6
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.1e-09 67.4 51 56.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 2.5e-09 66.2 140 34.3
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 7.3e-09 64.7 123 33.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 1.2e-08 63.9 123 33.3
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.6e-08 63.5 112 36.6
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 6.1e-08 61.6 114 36.0
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 2.0e-06 56.6 93 39.8


User provided reference genes

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