Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.2e-95 353.2 183 100.0
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 4.9e-73 278.1 167 85.6
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 3.9e-70 268.5 167 83.2
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 4.3e-69 265.0 167 80.8
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 5.6e-69 264.6 167 82.6
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 9.5e-69 263.8 167 79.0
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 1.2e-68 263.5 167 80.8
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 1.2e-68 263.5 167 80.8
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 1.5e-66 256.5 167 79.0
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 1.5e-66 256.5 167 79.0
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 1.5e-66 256.5 167 79.0
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 1.3e-65 253.4 167 79.0
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 6.4e-65 251.1 162 80.2
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 8.3e-65 250.8 162 80.2
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 1.9e-64 249.6 167 76.6
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 4.6e-63 245.0 167 73.7
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 2.6e-50 202.6 167 61.1
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 3.5e-39 165.6 167 52.7
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 3.3e-37 159.1 104 76.0
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 1.3e-36 157.1 167 49.1
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 2.8e-36 156.0 167 49.7
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 3.6e-36 155.6 165 49.1
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 4.8e-36 155.2 167 49.7
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 6.2e-36 154.8 167 47.9
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 1.8e-35 153.3 167 49.7
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 1.8e-35 153.3 167 48.5
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 3.1e-35 152.5 167 47.9
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 6.9e-35 151.4 109 76.1
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 9.0e-35 151.0 167 47.9
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 9.0e-35 151.0 167 48.5
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 2.0e-34 149.8 129 62.8
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 3.4e-34 149.1 167 46.1
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 3.4e-34 149.1 167 47.3
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 3.4e-34 149.1 167 45.5
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 2.2e-33 146.4 167 43.7
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 8.4e-33 144.4 167 44.9
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 1.1e-32 144.1 167 47.9
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 1.2e-31 140.6 167 44.9
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 1.6e-31 140.2 167 44.9
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 1.3e-30 137.1 168 44.6
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 3.9e-30 135.6 167 42.5
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 1.1e-29 134.0 169 43.2
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 4.3e-29 132.1 167 42.5
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 4.3e-29 132.1 167 42.5
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 5.6e-29 131.7 167 42.5
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 5.6e-29 131.7 168 43.5
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 9.6e-29 131.0 167 38.9
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 1.3e-28 130.6 167 43.1
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 2.8e-28 129.4 167 41.9
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 2.8e-28 129.4 167 40.7
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 6.2e-28 128.3 167 41.9
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 1.4e-27 127.1 167 40.7
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 2.4e-27 126.3 167 41.9
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 5.3e-27 125.2 168 41.1
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 3.4e-26 122.5 167 40.1
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 4.5e-26 122.1 167 38.9
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 4.5e-26 122.1 167 40.7
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 1.3e-25 120.6 167 40.1
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 1.3e-25 120.6 167 39.5
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 2.9e-25 119.4 168 39.9
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 2.9e-25 119.4 167 38.9
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 4.9e-25 118.6 167 39.5
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 1.1e-24 117.5 167 36.5
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 1.9e-24 116.7 163 39.3
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 2.4e-24 116.3 167 35.9
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 2.4e-24 116.3 167 40.1
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 2.4e-24 116.3 167 38.9
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 3.2e-24 115.9 168 36.9
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 3.2e-24 115.9 168 37.5
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 3.2e-24 115.9 167 38.9
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 4.2e-24 115.5 165 37.0
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 4.2e-24 115.5 167 39.5
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 5.5e-24 115.2 166 38.0
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 7.1e-24 114.8 158 41.1
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.6e-23 113.6 159 39.6
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 2.1e-23 113.2 167 38.3
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 2.7e-23 112.8 172 39.5
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 3.5e-23 112.5 168 37.5
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 4.6e-23 112.1 150 40.0
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 2.3e-22 109.8 167 36.5
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 8.7e-22 107.8 148 39.2
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 1.9e-21 106.7 127 40.9
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 4.3e-21 105.5 167 36.5
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 9.6e-21 104.4 166 33.1
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 1.5e-18 97.1 161 33.5
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 2.5e-16 89.7 167 32.3
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 6.0e-15 85.1 163 30.1
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 7.9e-15 84.7 167 34.1
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 7.9e-15 84.7 118 40.7
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 7.9e-15 84.7 163 31.3
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 7.9e-15 84.7 151 35.1
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 2.2e-12 76.6 122 35.2
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 3.2e-08 62.8 150 30.0


User provided reference genes

Program Settings