Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G01310 Arabidopsis thaliana HOM05D000552 ORTHO05D081746 6.3e-21 103.2 54 100.0
AT1G47210 Arabidopsis thaliana HOM05D000552 ORTHO05D000469 2.8e-16 87.8 53 88.7
AL1G53330 Arabidopsis lyrata HOM05D000552 ORTHO05D000469 3.2e-12 74.3 53 79.2
Carub.0001s3597 Capsella rubella HOM05D000552 ORTHO05D000469 1.6e-11 72.0 53 75.5
CARHR036750 Cardamine hirsuta HOM05D000552 ORTHO05D000469 5.6e-09 63.5 53 67.9
Thhalv10011590m.g Eutrema salsugineum HOM05D000552 ORTHO05D000469 7.3e-09 63.2 53 66.0
Sp1g34340 Schrenkiella parvula HOM05D000552 ORTHO05D000469 2.3e-07 58.2 53 66.0
BcaC05g27616 Brassica carinata HOM05D000552 ORTHO05D000469 1.2e-06 55.8 47 66.0
A05p21440 Brassica napus HOM05D000552 ORTHO05D000469 1.2e-06 55.8 47 66.0
C05p36040 Brassica napus HOM05D000552 ORTHO05D000469 1.2e-06 55.8 47 66.0
BolC5t32327H Brassica oleracea HOM05D000552 ORTHO05D000469 1.2e-06 55.8 47 66.0
BraA05t21053Z Brassica rapa HOM05D000552 ORTHO05D000469 1.2e-06 55.8 47 66.0
Carub.0008s0564 Capsella rubella HOM05D000552 ORTHO05D000469 1.2e-06 55.8 44 63.6
AT5G43080 Arabidopsis thaliana HOM05D000552 ORTHO05D000469 1.5e-06 55.5 44 63.6
AL8G17570 Arabidopsis lyrata HOM05D000552 ORTHO05D000469 2.0e-06 55.1 44 63.6
BcaB07g33853 Brassica carinata HOM05D000552 ORTHO05D000469 2.0e-06 55.1 53 64.2
BcaC08g42931 Brassica carinata HOM05D000552 ORTHO05D000469 2.0e-06 55.1 53 64.2
C06p01680 Brassica napus HOM05D000552 ORTHO05D000469 2.0e-06 55.1 53 64.2
BolC6t35299H Brassica oleracea HOM05D000552 ORTHO05D000469 2.0e-06 55.1 53 64.2
BcaB04g17545 Brassica carinata HOM05D000552 ORTHO05D000469 3.4e-06 54.3 54 61.1
A10p06630 Brassica napus HOM05D000552 ORTHO05D000469 3.4e-06 54.3 53 62.3
BraA10t42918Z Brassica rapa HOM05D000552 ORTHO05D000469 3.4e-06 54.3 53 62.3
A08p05920 Brassica napus HOM05D000552 ORTHO05D000469 5.8e-06 53.5 53 52.8
THA.LOC104820502 Tarenaya hassleriana HOM05D000552 ORTHO05D000469 5.8e-06 53.5 46 63.0
Aa31LG9G13190 Aethionema arabicum HOM05D000552 ORTHO05D000469 9.8e-06 52.8 46 56.5
BcaC07g37234 Brassica carinata HOM05D000552 ORTHO05D000469 9.8e-06 52.8 53 52.8
C08p06550 Brassica napus HOM05D000552 ORTHO05D000469 9.8e-06 52.8 53 52.8
BolC8t47501H Brassica oleracea HOM05D000552 ORTHO05D000469 9.8e-06 52.8 53 52.8
Carub.0001s3600 Capsella rubella HOM05D000552 ORTHO05D000469 9.8e-06 52.8 46 63.0
Thhalv10003238m.g Eutrema salsugineum HOM05D000552 ORTHO05D000469 9.8e-06 52.8 45 62.2
Thecc.08G094400 Theobroma cacao HOM05D000552 ORTHO05D000469 9.8e-06 52.8 47 63.8


User provided reference genes

Program Settings