Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G76740 Arabidopsis thaliana HOM05D010491 ORTHO05D012559 0.0e+00 2687.5 1533 100.0
AL2G36890 Arabidopsis lyrata HOM05D010491 ORTHO05D012559 0.0e+00 1254.6 1608 54.0
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 1.5e-239 834.3 1882 38.7
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 4.8e-190 669.8 2040 35.5
Sp5g31880 Schrenkiella parvula HOM05D010491 ORTHO05D012559 5.9e-188 662.9 1411 40.4
BraA07t31765Z Brassica rapa HOM05D010491 ORTHO05D012559 2.9e-187 660.6 2008 35.7
C06p50950 Brassica napus HOM05D010491 ORTHO05D012559 1.6e-177 628.2 2296 31.3
BolC6t40120H Brassica oleracea HOM05D010491 ORTHO05D012559 6.8e-136 490.0 2015 31.0
Aa31LG4G6810 Aethionema arabicum HOM05D010491 ORTHO05D012559 2.2e-118 431.8 2194 30.5
Thhalv10018017m.g Eutrema salsugineum HOM05D010491 ORTHO05D012559 1.4e-101 375.9 1333 32.3
Carub.0002s2365 Capsella rubella HOM05D010491 ORTHO05D012559 2.8e-81 308.5 1449 28.2
Sp5g31890 Schrenkiella parvula HOM05D010491 ORTHO05D012559 4.1e-40 171.8 325 40.3
A07p28380 Brassica napus HOM05D010491 ORTHO05D012559 5.0e-38 164.9 744 28.5
BcaB02g07074 Brassica carinata HOM05D010491 ORTHO05D012559 7.0e-32 144.4 724 28.2
THA.LOC104812032 Tarenaya hassleriana HOM05D010491 ORTHO05D010674 1.1e-29 137.1 1090 26.0
BolC6t38310H Brassica oleracea HOM05D010491 ORTHO05D012559 6.0e-23 114.8 615 26.5
BcaC08g45512 Brassica carinata HOM05D010491 ORTHO05D012559 7.3e-21 107.8 646 25.9
AT1G76840 Arabidopsis thaliana HOM05D010491 ORTHO05D012559 2.8e-20 105.9 177 42.4
C06p31820 Brassica napus HOM05D010491 ORTHO05D012559 2.6e-18 99.4 646 25.1
BraA07t30474Z Brassica rapa HOM05D010491 ORTHO05D012559 6.4e-17 94.7 482 27.2
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 3.9e-14 85.5 108 47.2
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 9.6e-13 80.9 100 45.0
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 9.6e-13 80.9 110 46.4
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 4.7e-12 78.6 127 44.9
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.8e-11 76.6 197 32.0
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 2.0e-10 73.2 119 41.2
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 2.6e-10 72.8 199 34.2
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 9.9e-10 70.9 291 29.2
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 9.9e-10 70.9 291 29.2
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 9.9e-10 70.9 422 25.1
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 1.3e-09 70.5 338 27.2
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 2.2e-09 69.7 129 39.5
FAN27G3106 Fragaria x ananassa HOM05D012764 ORTHO05D017940 8.4e-09 67.8 229 30.1
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 1.4e-08 67.0 163 35.6
FvH4_2g13370 Fragaria vesca HOM05D012764 ORTHO05D017940 1.9e-08 66.6 228 30.3
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 3.2e-08 65.9 350 29.4
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 3.2e-08 65.9 324 29.3
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 5.4e-08 65.1 199 33.2
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 9.3e-08 64.3 324 29.0
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 1.2e-07 63.9 310 28.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-07 63.5 256 28.9
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 2.1e-07 63.2 328 27.7
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 3.5e-07 62.4 311 28.0
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 6.0e-07 61.6 150 33.3
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 6.0e-07 61.6 265 27.5
FAN15G3692 Fragaria x ananassa HOM05D012764 ORTHO05D017940 6.0e-07 61.6 157 36.3
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 7.8e-07 61.2 136 35.3
VMungo0464G2099 Vigna mungo HOM05D028233 ORTHO05D012559 7.8e-07 61.2 42 76.2
Glyma.16G165600 Glycine max HOM05D028233 ORTHO05D015681 1.7e-06 60.1 43 69.8
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 1.7e-06 60.1 273 29.3
Glyma.02G080700 Glycine max HOM05D028233 ORTHO05D015681 2.3e-06 59.7 56 62.5
Phvul.004G092800 Phaseolus vulgaris HOM05D028233 ORTHO05D015681 2.3e-06 59.7 42 76.2
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 3.0e-06 59.3 46 65.2
SalBow7G1875 Salvia bowleyana HOM05D027784 ORTHO05D010674 8.7e-06 57.8 360 24.7


User provided reference genes

Program Settings