Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 5.2e-59 230.7 106 100.0
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 9.1e-56 219.9 104 96.2
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 9.4e-53 209.9 106 85.8
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.0e-51 206.5 104 87.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.2e-49 198.7 104 83.7
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.4e-48 194.1 104 81.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 7.0e-48 193.7 102 83.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 3.5e-47 191.4 105 81.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 5.9e-47 190.7 105 81.0
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 5.9e-47 190.7 105 81.0
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-45 186.4 104 78.8
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-45 186.4 104 78.8
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.9e-45 185.7 106 78.3
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 7.2e-45 183.7 106 77.4
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.6e-44 182.6 105 77.1
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-44 182.2 109 75.2
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-44 182.2 109 75.2
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.0e-43 177.9 105 77.1
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.5e-42 176.0 102 78.4
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.2e-39 166.4 101 70.3
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.8e-36 155.2 95 70.5
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 1.0e-35 153.3 101 62.4
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.8e-35 152.5 101 66.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.8e-35 150.6 101 62.4
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.8e-35 150.6 101 62.4
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.8e-35 150.6 101 62.4
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.8e-35 150.6 101 62.4
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 6.8e-35 150.6 99 63.6
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.0e-34 149.1 101 63.4
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.0e-34 149.1 101 62.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 4.4e-34 147.9 101 62.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.7e-34 147.5 101 61.4
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.5e-34 147.1 102 61.8
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.3e-33 146.4 101 61.4
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.3e-33 146.4 101 61.4
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.3e-33 146.4 101 60.4
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.7e-33 146.0 100 59.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.2e-33 145.6 100 60.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.2e-33 145.6 100 60.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.2e-33 145.6 101 62.4
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 2.9e-33 145.2 101 59.4
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.4e-33 144.1 98 61.2
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.4e-33 144.1 98 61.2
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 6.4e-33 144.1 98 61.2
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.1e-32 143.3 99 63.6
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.8e-32 142.5 101 60.4
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.4e-32 142.1 101 59.4
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.1e-32 141.4 101 59.4
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.0e-31 139.0 101 58.4
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 2.7e-31 138.7 104 56.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.6e-31 137.9 92 64.1
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.9e-31 137.5 101 56.4
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 5.9e-31 137.5 104 55.8
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 5.9e-31 137.5 90 64.4
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 5.9e-31 137.5 101 57.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 7.8e-31 137.1 102 56.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.0e-30 136.7 94 60.6
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.3e-30 136.3 104 55.8
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.7e-30 136.0 100 54.0
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.0e-30 134.4 89 61.8
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 6.6e-30 134.0 101 56.4
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 6.6e-30 134.0 100 58.0
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 2.5e-29 132.1 99 57.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.3e-29 131.7 100 55.0
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.2e-28 129.8 90 60.0
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.8e-28 128.6 91 63.7
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.7e-28 127.9 66 75.8
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.2e-28 127.5 84 64.3
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 6.2e-28 127.5 100 52.0
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 6.2e-28 127.5 94 56.4
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 8.0e-28 127.1 97 54.6
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 5.2e-27 124.4 99 51.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.2e-26 123.2 87 57.5
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.2e-26 123.2 96 59.4
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.5e-26 122.9 96 57.3
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.0e-26 122.5 96 57.3
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.4e-26 121.7 62 75.8
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.3e-25 119.8 98 55.1
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.7e-25 118.2 101 51.5
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 3.7e-25 118.2 87 60.9
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.4e-25 117.5 99 50.5
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 8.3e-25 117.1 100 48.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.9e-24 115.9 98 55.1
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.9e-24 115.9 98 55.1
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 5.4e-24 114.4 102 49.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 5.4e-24 114.4 96 53.1
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 9.2e-24 113.6 88 55.7
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.6e-23 112.8 89 53.9
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.0e-23 112.5 82 61.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.0e-23 112.5 96 53.1
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 6.0e-23 110.9 95 52.6
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 7.8e-23 110.5 96 55.2
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.0e-22 110.2 79 59.5
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.0e-22 108.6 94 47.9
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.9e-22 108.2 96 50.0
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 6.6e-22 107.5 97 51.5
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 8.6e-22 107.1 80 57.5
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 8.6e-22 107.1 63 66.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.1e-21 106.7 109 47.7
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.9e-21 105.9 66 66.7
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 4.3e-21 104.8 87 49.4
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 9.5e-21 103.6 118 42.4
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.8e-20 102.1 113 46.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.1e-19 98.6 49 81.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 8.9e-19 97.1 51 74.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.6e-18 95.5 48 77.1
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 3.4e-18 95.1 86 51.2
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 8.9e-11 70.5 93 35.5
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 1.1e-08 63.5 98 34.7


User provided reference genes

Program Settings