Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G74200 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.6e-73 280.4 303 100.0
BcaC08g45603 Brassica carinata HOM05D000311 ORTHO05D000183 7.9e-28 128.6 92 67.4
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 7.9e-28 128.6 92 67.4
BcaC05g24568 Brassica carinata HOM05D000311 ORTHO05D000183 3.0e-27 126.7 92 63.0
CARHR218490 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.9e-27 126.3 93 64.5
BolC6t38467H Brassica oleracea HOM05D000311 ORTHO05D000183 9.7e-26 121.7 92 65.2
BolC6t38470H Brassica oleracea HOM05D000311 ORTHO05D000183 9.0e-24 115.2 88 65.9
C02p31680 Brassica napus HOM05D000311 ORTHO05D000183 1.3e-22 111.3 95 58.9
AT1G74170 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.9e-22 110.2 76 69.7
C06p48370 Brassica napus HOM05D000311 ORTHO05D000183 2.5e-21 107.1 92 59.8
Thhalv10018093m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 5.5e-21 105.9 93 57.0
C06p33570 Brassica napus HOM05D000311 ORTHO05D000183 7.2e-21 105.5 83 63.9
BolC2t09198H Brassica oleracea HOM05D000311 ORTHO05D000183 2.1e-20 104.0 94 57.4
BcaB05g24841 Brassica carinata HOM05D000311 ORTHO05D000183 4.6e-20 102.8 93 54.8
C02p31730 Brassica napus HOM05D000311 ORTHO05D000183 4.6e-20 102.8 94 56.4
Thhalv10018087m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 6.1e-20 102.4 94 56.4
AT1G74190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.0e-19 101.7 92 55.4
A07p29500 Brassica napus HOM05D000311 ORTHO05D000183 3.9e-19 99.8 94 53.2
BraA07t30591Z Brassica rapa HOM05D000311 ORTHO05D000183 3.9e-19 99.8 94 53.2
AL2G34080 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 5.1e-19 99.4 92 54.3
BolC6t38339H Brassica oleracea HOM05D000311 ORTHO05D000183 5.1e-19 99.4 77 64.9
Aa31LG4G4490 Aethionema arabicum HOM05D000311 ORTHO05D000183 1.9e-18 97.4 94 53.2
CARHR059840 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.8e-17 93.6 91 54.9
A02p19140 Brassica napus HOM05D000311 ORTHO05D000183 6.9e-16 89.0 80 57.5
BraA02t06964Z Brassica rapa HOM05D000311 ORTHO05D000183 6.9e-16 89.0 80 57.5
Carub.0004s0513 Capsella rubella HOM05D000311 ORTHO05D000183 1.5e-15 87.8 91 51.6
BcaB01g03008 Brassica carinata HOM05D000311 ORTHO05D000183 7.7e-15 85.5 89 49.4
BcaC03g15487 Brassica carinata HOM05D000311 ORTHO05D000183 1.0e-14 85.1 80 56.2
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 1.0e-14 85.1 92 47.8
BraA01t02955Z Brassica rapa HOM05D000311 ORTHO05D000183 1.0e-14 85.1 89 49.4
C06p38520 Brassica napus HOM05D000311 ORTHO05D000183 2.2e-14 84.0 62 64.5
BolC8t52591H Brassica oleracea HOM05D000311 ORTHO05D000183 2.9e-14 83.6 89 43.8
BraA07t30498Z Brassica rapa HOM05D000311 ORTHO05D018764 2.5e-13 80.5 77 54.5
BraA07t31548Z Brassica rapa HOM05D000311 ORTHO05D000183 3.2e-13 80.1 75 54.7
AL1G17310 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 5.5e-13 79.3 89 42.7
BcaB03g15370 Brassica carinata HOM05D000311 ORTHO05D000183 5.5e-13 79.3 94 46.8
AL3G12670 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 9.4e-13 78.6 89 42.7
CARHR067390 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.6e-12 77.8 76 56.6
C06p33590 Brassica napus HOM05D000311 ORTHO05D000183 2.7e-12 77.0 64 57.8
CARHR067450 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.7e-12 77.0 68 55.9
CARHR067360 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.6e-12 76.6 53 64.2
BolC3t13452H Brassica oleracea HOM05D000311 ORTHO05D000183 7.9e-12 75.5 70 52.9
BcaC08g45538 Brassica carinata HOM05D000311 ORTHO05D000183 1.0e-11 75.1 76 55.3
AT1G58190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.3e-11 73.9 90 45.6
CARHR067560 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.9e-11 73.2 66 59.1
CARHR053860 Cardamine hirsuta HOM05D000311 ORTHO05D000183 5.1e-11 72.8 89 42.7
A02p19170 Brassica napus HOM05D000311 ORTHO05D000183 8.8e-11 72.0 72 51.4
C04p51910 Brassica napus HOM05D000311 ORTHO05D000183 8.8e-11 72.0 91 41.8
A07p40030 Brassica napus HOM05D000311 ORTHO05D000183 1.5e-10 71.2 77 49.4
CARHR067550 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.5e-10 71.2 93 41.9
BcaC08g46821 Brassica carinata HOM05D000311 ORTHO05D000183 2.0e-10 70.9 72 48.6
C06p48340 Brassica napus HOM05D000311 ORTHO05D000183 2.0e-10 70.9 72 48.6
BolC6t39865H Brassica oleracea HOM05D000311 ORTHO05D000183 2.0e-10 70.9 72 48.6
BolC6t39866H Brassica oleracea HOM05D000311 ORTHO05D000183 2.0e-10 70.9 94 43.6
BraA02t06962Z Brassica rapa HOM05D000311 ORTHO05D000183 2.6e-10 70.5 78 46.2
Sp5g29380 Schrenkiella parvula HOM05D000311 ORTHO05D000183 2.6e-10 70.5 68 54.4
Thhalv10018082m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 3.3e-10 70.1 69 50.7
BcaNung00102 Brassica carinata HOM05D000311 ORTHO05D000183 5.7e-10 69.3 77 41.6
CARHR060140 Cardamine hirsuta HOM05D000311 ORTHO05D000183 7.4e-10 68.9 70 52.9
BcaB06g28018 Brassica carinata HOM05D000311 ORTHO05D000183 9.7e-10 68.6 71 46.5
C06p32140 Brassica napus HOM05D000311 ORTHO05D000183 9.7e-10 68.6 41 73.2
BcaB05g24837 Brassica carinata HOM05D000311 ORTHO05D000183 1.3e-09 68.2 92 43.5
Carub.0001s0670 Capsella rubella HOM05D000311 ORTHO05D000183 2.2e-09 67.4 71 43.7
CARHR067350 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.2e-09 67.4 71 49.3
Thhalv10018202m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 2.8e-09 67.0 69 50.7
PGR064G0010 Punica granatum HOM05D000311 ORTHO05D000183 2.8e-09 67.0 67 46.3
C06p48310 Brassica napus HOM05D000311 ORTHO05D000183 3.7e-09 66.6 74 50.0
BraA07t31544Z Brassica rapa HOM05D000311 ORTHO05D000183 3.7e-09 66.6 93 40.9
Nn8g39655 Nelumbo nucifera HOM05D000311 ORTHO05D000183 3.7e-09 66.6 89 36.0
Thhalv10018158m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 4.8e-09 66.2 69 49.3
BraA04t17560Z Brassica rapa HOM05D000311 ORTHO05D000183 1.1e-08 65.1 91 42.9
BcaB01g05211 Brassica carinata HOM05D001733 ORTHO05D000183 1.4e-08 64.7 70 47.1
AT2G25470 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.8e-08 64.3 71 42.3
CARHR183940 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.8e-08 64.3 51 60.8
AL4G16880 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 2.4e-08 63.9 71 43.7
CARHR067380 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.4e-08 63.9 63 49.2
CARHR053840 Cardamine hirsuta HOM05D000311 ORTHO05D018764 4.1e-08 63.2 89 40.4
C05p16890 Brassica napus HOM05D000311 ORTHO05D000183 5.3e-08 62.8 64 50.0
CSS0014002 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 5.3e-08 62.8 90 36.7
Carub.0004s0515 Capsella rubella HOM05D000311 ORTHO05D000183 5.3e-08 62.8 71 47.9
PGR119G0542 Punica granatum HOM05D000311 ORTHO05D000183 5.3e-08 62.8 67 44.8
BcaB05g24838 Brassica carinata HOM05D000311 ORTHO05D000183 7.0e-08 62.4 65 49.2
BolC4t26761H Brassica oleracea HOM05D000311 ORTHO05D000183 7.0e-08 62.4 91 38.5
BcaB07g31881 Brassica carinata HOM05D000311 ORTHO05D000183 9.1e-08 62.0 71 45.1
AT1G74180 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 1.2e-07 61.6 63 50.8
Nn8g39596 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-07 61.2 76 42.1
BcaB07g34037 Brassica carinata HOM05D001506 ORTHO05D000455 2.6e-07 60.5 92 38.0
A06p14730 Brassica napus HOM05D000311 ORTHO05D000183 2.6e-07 60.5 71 46.5
CARHR007120 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.4e-07 60.1 77 36.4
PGR064G0015 Punica granatum HOM05D000311 ORTHO05D000183 4.5e-07 59.7 75 40.0
Ciclev10025050m.g Citrus clementina HOM05D000311 ORTHO05D000183 5.9e-07 59.3 95 38.9
Eucgr.C04078 Eucalyptus grandis HOM05D000311 ORTHO05D000183 5.9e-07 59.3 96 33.3
MBI18_g17393_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 1.3e-06 58.2 67 40.3
TAR383G0953 Trochodendron aralioides HOM05D000153 ORTHO05D000118 1.3e-06 58.2 71 40.8
BcaC07g41409 Brassica carinata HOM05D001506 ORTHO05D000455 1.7e-06 57.8 92 37.0
CARHR019250 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.7e-06 57.8 109 35.8
Eucgr.L03115 Eucalyptus grandis HOM05D000311 ORTHO05D000183 1.7e-06 57.8 76 38.2
C05p15660 Brassica napus HOM05D001506 ORTHO05D000455 2.9e-06 57.0 88 37.5
Eucgr.C04407 Eucalyptus grandis HOM05D000311 ORTHO05D000183 3.8e-06 56.6 86 34.9
Thhalv10023377m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 3.8e-06 56.6 107 29.0
Medtr4g009930 Medicago truncatula HOM05D000311 ORTHO05D000183 3.8e-06 56.6 74 40.5
QL05p085204 Quercus lobata HOM05D000311 ORTHO05D000183 3.8e-06 56.6 84 34.5
BcaC05g25653 Brassica carinata HOM05D001506 ORTHO05D000455 8.5e-06 55.5 88 36.4
BolC5t30273H Brassica oleracea HOM05D001506 ORTHO05D000455 8.5e-06 55.5 88 36.4
Medtr8g077105 Medicago truncatula HOM05D000311 ORTHO05D000183 8.5e-06 55.5 114 30.7


User provided reference genes

Program Settings