Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 1.2e-74 283.1 145 100.0
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 4.6e-66 254.6 145 89.7
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 1.9e-59 232.6 143 82.5
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 2.1e-58 229.2 146 81.5
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 6.0e-58 227.6 146 80.1
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 6.0e-58 227.6 146 80.1
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 1.7e-57 226.1 146 79.5
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 6.6e-57 224.2 146 78.8
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 6.6e-57 224.2 146 78.8
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 2.8e-55 218.8 145 78.6
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 4.7e-55 218.0 136 80.1
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.4e-54 216.5 146 76.7
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.7e-41 172.9 145 66.2
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 1.9e-40 169.5 140 67.9
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 2.9e-28 129.0 134 59.7
BcaC08g45611 Brassica carinata HOM05D007960 ORTHO05D010026 6.9e-22 107.8 68 76.5
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 7.9e-18 94.4 116 46.6
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 1.3e-17 93.6 142 39.4
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 1.1e-16 90.5 111 46.8
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 7.4e-16 87.8 112 43.8
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 1.3e-15 87.0 74 58.1
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 2.2e-15 86.3 91 49.5
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.8e-15 85.9 87 51.7
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 4.8e-15 85.1 146 40.4
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 4.8e-15 85.1 146 40.4
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 6.3e-15 84.7 126 46.8
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 1.8e-14 83.2 122 42.6
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 2.4e-14 82.8 117 44.4
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 9.0e-14 80.9 133 43.6
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 4.5e-13 78.6 130 40.0
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 2.2e-12 76.3 108 44.4
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 3.8e-12 75.5 134 40.3
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 8.5e-12 74.3 78 53.8
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 8.5e-12 74.3 78 53.8
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.1e-11 73.9 142 39.4
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 1.1e-11 73.9 112 42.9
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 3.2e-11 72.4 124 40.3
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 5.5e-11 71.6 112 46.4
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 7.2e-11 71.2 117 37.6
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 9.4e-11 70.9 83 47.0
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.6e-10 70.1 130 40.0
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 2.1e-10 69.7 111 43.2
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.0e-09 67.4 82 46.3
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 1.4e-09 67.0 95 48.4
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 3.9e-09 65.5 135 35.6
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 2.5e-08 62.8 55 52.7
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 2.5e-08 62.8 87 48.3
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 4.3e-08 62.0 114 40.4
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 7.4e-08 61.2 114 38.6
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.7e-07 60.1 131 35.9
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 1.7e-07 60.1 119 39.5
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.7e-07 60.1 113 41.6
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.7e-07 60.1 104 42.3
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.2e-07 59.7 77 50.6
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 2.2e-07 59.7 101 42.6
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.2e-07 59.7 122 38.5
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.8e-07 59.3 119 38.7
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 3.7e-07 58.9 77 51.9
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 3.7e-07 58.9 70 50.0
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 3.7e-07 58.9 123 41.5
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 6.3e-07 58.2 87 46.0
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 8.2e-07 57.8 70 47.1
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 8.2e-07 57.8 123 40.7
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 1.1e-06 57.4 64 51.6
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.1e-06 57.4 113 38.9
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 3.1e-06 55.8 119 35.3
COL.COLO4_32178 Corchorus olitorius HOM05D007960 ORTHO05D010026 4.1e-06 55.5 43 55.8
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 4.1e-06 55.5 144 33.3
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 5.3e-06 55.1 97 40.2
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 5.3e-06 55.1 77 49.4
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 9.1e-06 54.3 112 33.0


User provided reference genes

Program Settings