Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 9.7e-183 643.3 307 100.0
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 7.2e-170 600.5 307 92.5
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.2e-163 578.9 296 93.2
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 3.0e-160 568.5 308 87.3
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 4.4e-159 564.7 307 87.3
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.3e-158 563.1 307 87.6
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.5e-154 549.7 308 86.0
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.5e-154 549.7 308 86.0
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 7.2e-154 547.4 307 85.3
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 9.4e-154 547.0 308 85.1
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.3e-147 526.6 310 80.0
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.6e-116 423.3 306 67.6
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.4e-109 400.2 259 69.9
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.2e-108 397.1 269 68.0
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.7e-107 393.3 262 67.9
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 3.9e-107 392.1 273 67.0
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.6e-105 386.7 253 69.2
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 8.1e-105 384.4 251 70.1
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 3.1e-104 382.5 269 65.1
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.5e-103 380.2 249 67.9
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.5e-103 380.2 267 64.8
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 4.4e-103 378.6 300 60.7
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 1.3e-102 377.1 269 63.9
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 6.4e-102 374.8 251 67.3
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 4.2e-101 372.1 251 63.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 4.2e-101 372.1 250 64.8
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 7.1e-101 371.3 265 64.2
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 9.3e-101 370.9 271 62.0
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.6e-100 370.2 263 64.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 7.8e-100 367.9 251 63.3
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.3e-99 367.1 249 65.9
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.7e-99 366.7 249 66.3
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.0e-99 365.9 249 65.9
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 6.6e-99 364.8 300 59.0
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.9e-98 363.2 249 64.7
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 2.5e-98 362.8 274 61.3
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 5.6e-98 361.7 250 63.6
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 5.6e-98 361.7 284 57.4
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 9.6e-98 360.9 283 58.0
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.6e-97 360.1 247 66.4
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 3.6e-97 359.0 249 63.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 6.2e-97 358.2 247 66.0
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 6.2e-97 358.2 250 62.4
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.4e-96 357.1 265 62.3
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.2e-95 354.0 249 63.1
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.2e-95 354.0 295 57.3
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.5e-95 353.6 272 59.9
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 2.6e-95 352.8 251 63.3
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 4.5e-95 352.1 250 62.0
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 4.5e-95 352.1 249 62.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.2e-93 345.9 268 60.1
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.2e-93 345.9 284 59.9
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 3.2e-93 345.9 251 64.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 5.4e-93 345.1 253 62.8
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 5.4e-93 345.1 285 59.3
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 7.1e-93 344.7 249 63.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 9.3e-93 344.4 253 64.0
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.2e-92 344.0 249 60.6
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 2.7e-92 342.8 264 61.7
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 3.0e-91 339.3 232 65.9
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 3.0e-91 339.3 282 59.6
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 6.6e-91 338.2 232 65.5
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 6.6e-91 338.2 271 58.3
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 8.7e-91 337.8 317 50.8
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.1e-90 337.4 232 65.9
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 9.6e-90 334.3 292 55.1
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.6e-89 333.6 254 62.2
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 2.0e-87 326.6 259 57.9
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 2.6e-87 326.2 253 58.9
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 2.9e-86 322.8 250 57.6
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 3.8e-86 322.4 299 53.2
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.3e-83 313.9 299 51.5
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.3e-83 313.9 232 61.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 5.6e-82 308.5 265 58.1
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 7.6e-79 298.1 241 53.9
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.3e-75 287.3 268 53.0
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 1.1e-74 284.3 261 52.1
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 1.6e-73 280.4 255 53.3
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 2.4e-72 276.6 204 58.3
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.1e-69 267.7 274 48.5
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 1.6e-65 253.8 202 56.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.1e-64 251.1 272 46.7
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 3.6e-60 236.1 229 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 4.1e-56 222.6 247 42.9
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.0e-54 218.0 104 94.2
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 6.5e-54 215.3 258 43.0
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.3e-50 203.0 179 51.4
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 6.3e-49 198.7 256 40.2
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 4.5e-47 192.6 153 58.8
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 2.9e-46 189.9 130 62.3
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.2e-45 186.4 141 65.2
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.3e-41 174.5 246 37.8
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.7e-39 166.8 107 62.6
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-32 144.4 82 69.5
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 3.5e-31 139.8 130 56.9
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 6.8e-27 125.6 79 64.6
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 9.8e-26 121.7 278 29.5
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 7.0e-24 115.5 84 60.7
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 3.8e-22 109.8 68 72.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 9.5e-21 105.1 65 66.2
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.0e-19 101.7 60 73.3
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-19 100.5 51 78.4
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-19 100.5 51 78.4
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 4.4e-18 96.3 67 68.7
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 7.8e-15 85.5 66 60.6
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 7.8e-15 85.5 66 60.6
BcaB04g17422 Brassica carinata HOM05D007092 ORTHO05D008947 1.5e-13 81.3 49 75.5
C03p19630 Brassica napus HOM05D000267 ORTHO05D020178 2.0e-10 70.9 49 67.3
C03p03960 Brassica napus HOM05D000267 ORTHO05D020178 3.4e-10 70.1 49 67.3
BolC3t12933H Brassica oleracea HOM05D000267 ORTHO05D020178 3.4e-10 70.1 49 67.3
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 4.9e-09 66.2 53 50.9
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 4.9e-09 66.2 53 50.9
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.9e-08 64.3 59 47.5
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.2e-08 63.5 83 44.6
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 1.6e-07 61.2 32 78.1
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.6e-07 61.2 47 61.7
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.8e-07 58.9 54 50.0
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.3e-06 58.2 46 52.2
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 8.6e-06 55.5 43 48.8


User provided reference genes

Program Settings