Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 6.4e-31 137.1 88 100.0
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 5.6e-27 124.0 88 90.9
Carub.0002s1954 Capsella rubella HOM05D003238 ORTHO05D003571 2.5e-19 98.6 91 63.7
Sp5g27750 Schrenkiella parvula HOM05D003238 ORTHO05D003571 1.3e-18 96.3 92 80.4
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 3.7e-18 94.7 96 61.5
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 9.0e-17 90.1 91 74.7
C06p34720 Brassica napus HOM05D003238 ORTHO05D003571 1.5e-16 89.4 92 72.8
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 3.4e-16 88.2 92 65.2
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 3.4e-16 88.2 92 65.2
Aa31LG4G3050 Aethionema arabicum HOM05D003238 ORTHO05D003571 1.0e-15 86.7 81 74.1
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 1.8e-12 75.9 79 75.9
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 4.3e-11 71.2 78 70.5
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 7.4e-11 70.5 80 66.2
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 9.7e-11 70.1 77 68.8
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 2.2e-10 68.9 79 60.8
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 2.2e-10 68.9 79 72.2
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 2.8e-10 68.6 79 69.6
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 3.7e-10 68.2 78 67.9
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 3.7e-10 68.2 78 67.9
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 4.8e-10 67.8 78 67.9
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 4.8e-10 67.8 78 67.9
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 8.2e-10 67.0 56 67.9
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 8.2e-10 67.0 75 70.7
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 1.1e-09 66.6 78 67.9
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 1.1e-09 66.6 78 66.7
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.1e-09 66.6 50 72.0
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 1.4e-09 66.2 77 68.8
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 1.8e-09 65.9 52 63.5
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 2.4e-09 65.5 79 65.8
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 2.4e-09 65.5 79 65.8
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 2.4e-09 65.5 53 66.0
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 3.1e-09 65.1 79 65.8
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 3.1e-09 65.1 53 69.8
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 5.3e-09 64.3 79 65.8
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 5.3e-09 64.3 78 64.1
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 5.3e-09 64.3 79 65.8
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 5.3e-09 64.3 79 64.6
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 6.9e-09 63.9 51 66.7
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 9.1e-09 63.5 79 65.8
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 9.1e-09 63.5 77 66.2
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 9.1e-09 63.5 78 65.4
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 9.1e-09 63.5 79 67.1
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.2e-08 63.2 93 43.0
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 1.2e-08 63.2 79 68.4
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 1.2e-08 63.2 53 66.0
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 1.2e-08 63.2 88 62.5
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.5e-08 62.8 49 67.3
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 2.6e-08 62.0 77 66.2
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 2.6e-08 62.0 77 42.9
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.6e-08 62.0 50 72.0
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 3.4e-08 61.6 78 64.1
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 4.5e-08 61.2 80 62.5
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 4.5e-08 61.2 77 64.9
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 4.5e-08 61.2 84 69.0
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.9e-08 60.8 55 61.8
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 5.9e-08 60.8 79 65.8
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 5.9e-08 60.8 79 65.8
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 5.9e-08 60.8 76 69.7
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 5.9e-08 60.8 47 68.1
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 7.7e-08 60.5 83 61.4
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 1.0e-07 60.1 55 61.8
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 1.3e-07 59.7 49 63.3
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 1.3e-07 59.7 78 64.1
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.7e-07 59.3 77 62.3
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.7e-07 59.3 56 58.9
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 2.2e-07 58.9 78 62.8
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 2.2e-07 58.9 84 58.3
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 2.2e-07 58.9 48 64.6
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 2.2e-07 58.9 78 62.8
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.2e-07 58.9 56 60.7
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 2.9e-07 58.5 43 67.4
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 2.9e-07 58.5 51 62.7
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 2.9e-07 58.5 86 55.8
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.9e-07 58.5 51 68.6
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 2.9e-07 58.5 48 62.5
Nitab4.5_0009992g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 3.8e-07 58.2 50 62.0
Phvul.009G231100 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 3.8e-07 58.2 74 43.2
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 3.8e-07 58.2 77 66.2
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 5.0e-07 57.8 47 66.0
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 5.0e-07 57.8 77 63.6
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 6.5e-07 57.4 51 58.8
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 6.5e-07 57.4 57 54.4
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 6.5e-07 57.4 79 58.2
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 6.5e-07 57.4 79 58.2
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 6.5e-07 57.4 82 59.8
AUR62001519 Chenopodium quinoa HOM05D003238 ORTHO05D003571 8.5e-07 57.0 78 62.8
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 8.5e-07 57.0 51 56.9
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 8.5e-07 57.0 57 57.9
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.1e-06 56.6 79 55.7
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.1e-06 56.6 78 64.1
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 1.1e-06 56.6 50 62.0
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.1e-06 56.6 58 58.6
ECA247G2422 Erigeron canadensis HOM05D003238 ORTHO05D003571 1.4e-06 56.2 46 69.6
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.4e-06 56.2 79 57.0
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 1.4e-06 56.2 79 63.3
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 1.9e-06 55.8 51 58.8
EL10Ac7g16367 Beta vulgaris HOM05D003238 ORTHO05D003571 2.5e-06 55.5 48 62.5
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 2.5e-06 55.5 49 59.2
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 3.2e-06 55.1 83 57.8
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 3.2e-06 55.1 74 63.5
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.2e-06 54.7 79 59.5
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 4.2e-06 54.7 81 56.8
CANSAT56G2721 Cannabis sativa HOM05D003238 ORTHO05D003571 5.5e-06 54.3 78 39.7
Oeu004201.1 Olea europaea HOM05D003238 ORTHO05D003571 5.5e-06 54.3 78 43.6
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 5.5e-06 54.3 82 41.5
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 5.5e-06 54.3 62 53.2
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 9.4e-06 53.5 50 60.0


User provided reference genes

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