Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 4.4e-144 514.6 260 100.0
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 4.4e-112 408.3 265 81.9
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 3.8e-95 352.1 265 72.1
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 2.4e-94 349.4 268 69.8
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 4.2e-94 348.6 266 67.7
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 5.3e-89 331.6 264 68.6
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 2.9e-87 325.9 265 67.5
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 2.1e-85 319.7 264 66.7
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 2.3e-84 316.2 278 64.7
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.7e-77 292.7 261 64.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.5e-62 243.0 263 52.9
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 6.9e-57 224.9 181 69.6
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 5.9e-56 221.9 196 62.2
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 7.9e-53 211.5 168 71.4
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.8e-41 173.7 283 45.2
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.6e-40 170.6 272 41.2
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 3.6e-37 159.5 275 40.0
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 8.0e-37 158.3 294 40.1
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 3.0e-36 156.4 275 39.3
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 5.2e-36 155.6 273 41.0
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 8.8e-36 154.8 269 38.3
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.5e-35 154.1 257 40.5
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 2.0e-35 153.7 302 39.1
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 3.4e-35 152.9 261 37.9
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.4e-35 152.5 302 38.7
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 9.8e-35 151.4 323 36.2
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.3e-34 151.0 216 42.1
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.3e-34 151.0 297 37.4
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 2.2e-34 150.2 273 36.3
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 6.3e-34 148.7 284 34.9
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 8.3e-34 148.3 171 48.5
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.1e-33 147.9 171 49.7
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.4e-33 147.5 232 41.8
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.8e-33 147.1 266 40.2
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.4e-33 146.7 280 37.5
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 3.1e-33 146.4 268 39.2
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 3.1e-33 146.4 287 39.7
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 4.1e-33 146.0 280 37.9
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 7.0e-33 145.2 278 36.7
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 9.1e-33 144.8 265 40.8
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.2e-32 144.4 173 46.8
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 2.7e-32 143.3 312 33.0
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 5.9e-32 142.1 137 54.7
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 5.9e-32 142.1 290 35.5
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.7e-31 140.6 282 37.9
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.8e-31 139.4 300 34.0
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 3.6e-29 132.9 266 35.3
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.6e-29 132.9 282 33.7
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 4.7e-29 132.5 210 41.0
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 8.0e-29 131.7 250 36.8
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.0e-28 131.3 271 37.6
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 8.9e-28 128.3 287 34.1
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 8.9e-28 128.3 301 33.2
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.5e-27 127.5 260 35.8
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 2.0e-27 127.1 176 45.5
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.4e-27 126.3 259 35.5
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 4.4e-27 125.9 302 34.1
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 7.5e-27 125.2 224 40.6
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 1.3e-26 124.4 300 34.3
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 3.7e-26 122.9 284 32.7
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.7e-26 122.9 297 35.7
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 4.9e-26 122.5 173 43.4
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 1.1e-25 121.3 114 59.6
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.1e-25 121.3 263 31.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.4e-25 120.9 280 34.6
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.8e-25 120.6 196 41.8
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.8e-25 120.6 104 59.6
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 1.8e-25 120.6 273 33.3
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 4.1e-25 119.4 267 36.7
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 7.0e-25 118.6 148 43.9
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 4.5e-24 115.9 289 34.6
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.7e-23 114.0 179 45.3
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 5.0e-23 112.5 103 55.3
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 5.0e-23 112.5 328 29.6
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 3.3e-22 109.8 262 31.7
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.2e-21 107.8 203 37.4
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.4e-20 104.4 287 30.3
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.4e-20 104.4 219 35.2
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.4e-20 104.4 156 44.2
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.8e-20 104.0 299 31.1
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 5.2e-20 102.4 119 47.1
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 6.8e-20 102.1 300 29.0
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.2e-19 101.3 323 28.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.0e-19 100.5 121 47.9
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.0e-19 100.5 134 43.3
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 2.0e-19 100.5 158 42.4
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.6e-19 100.1 292 29.8
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 3.4e-19 99.8 170 40.6
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 1.3e-18 97.8 244 31.1
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.7e-18 97.4 224 35.7
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.1e-17 94.7 198 36.4
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.1e-17 94.7 98 54.1
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.1e-14 84.7 172 35.5
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 9.5e-14 81.6 286 28.0
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 2.8e-13 80.1 223 30.9
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 8.0e-13 78.6 105 42.9
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.2e-10 70.5 83 47.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 8.3e-10 68.6 64 50.0
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.7e-07 60.8 176 31.2
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 4.3e-06 56.2 134 32.8


User provided reference genes

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