Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.2e-109 399.8 199 100.0
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.1e-89 333.6 199 85.4
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.0e-89 331.6 198 84.8
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 6.9e-89 330.9 201 84.1
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.5e-88 329.7 199 82.9
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 5.8e-88 327.8 198 81.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.3e-87 326.6 199 82.4
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 2.1e-85 319.3 199 81.9
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 2.1e-85 319.3 199 81.9
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 1.0e-84 317.0 199 80.4
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 3.3e-83 312.0 197 79.7
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 3.1e-73 278.9 193 74.1
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.9e-70 269.6 197 67.0
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.6e-69 266.5 197 68.0
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.8e-68 263.1 197 65.5
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 6.7e-68 261.2 198 64.6
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.5e-67 260.0 206 61.2
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 3.3e-67 258.8 209 61.2
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 3.3e-67 258.8 208 61.5
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.3e-67 258.5 196 64.3
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 4.3e-67 258.5 197 65.5
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.7e-67 258.1 202 64.9
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 7.4e-67 257.7 199 64.8
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 9.7e-67 257.3 206 61.2
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.6e-66 256.5 199 64.8
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 2.8e-66 255.8 197 63.5
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.8e-66 255.8 202 61.4
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 6.3e-66 254.6 195 66.2
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 6.3e-66 254.6 197 64.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 6.3e-66 254.6 195 63.6
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.2e-66 254.2 199 63.8
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 8.2e-66 254.2 199 64.3
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 8.2e-66 254.2 197 63.5
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 8.2e-66 254.2 197 62.9
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.4e-65 253.4 204 62.3
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.8e-65 253.1 199 64.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 2.4e-65 252.7 198 62.1
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.1e-65 252.3 199 64.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 4.1e-65 251.9 195 64.1
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 4.1e-65 251.9 197 62.9
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 5.3e-65 251.5 196 64.8
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.3e-65 251.5 197 62.9
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 5.3e-65 251.5 195 64.1
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 6.9e-65 251.1 196 62.8
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 6.9e-65 251.1 202 60.4
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 9.1e-65 250.8 197 64.0
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.5e-64 250.0 195 62.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-64 250.0 200 65.0
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-64 250.0 200 65.0
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.0e-64 249.6 199 62.8
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.0e-64 249.6 197 63.5
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.6e-64 249.2 198 65.2
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.4e-64 248.8 198 63.6
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.4e-64 248.8 214 61.7
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 4.5e-64 248.4 204 59.8
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 4.5e-64 248.4 195 63.1
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 5.9e-64 248.1 199 63.8
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 5.9e-64 248.1 197 62.4
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 5.9e-64 248.1 197 62.4
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 5.9e-64 248.1 197 64.0
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 5.9e-64 248.1 203 60.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.0e-63 247.3 199 63.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.3e-63 246.9 196 62.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.7e-63 246.5 195 61.5
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 6.5e-63 244.6 197 63.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-62 243.8 196 64.3
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.4e-62 243.4 196 64.3
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.5e-62 242.7 196 64.3
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 2.5e-62 242.7 197 62.9
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.2e-62 242.3 198 63.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 7.2e-62 241.1 198 61.6
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.6e-61 240.0 198 62.1
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.7e-61 239.2 195 62.1
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.8e-60 236.5 197 59.9
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.3e-60 236.1 195 61.5
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.0e-60 235.7 191 62.8
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.9e-60 235.3 195 57.9
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.9e-60 235.3 210 60.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 8.8e-60 234.2 197 57.9
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.0e-59 233.0 196 57.1
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.0e-59 233.0 197 60.4
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 5.7e-59 231.5 197 59.4
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.7e-58 229.9 199 60.3
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 2.8e-58 229.2 195 58.5
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 6.3e-58 228.0 191 58.6
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.4e-57 226.9 189 61.4
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.4e-57 226.9 197 59.4
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.5e-56 223.4 259 48.3
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 8.5e-55 217.6 164 65.2
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 6.1e-53 211.5 154 66.2
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.3e-52 209.5 144 70.1
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 4.4e-51 205.3 198 53.5
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 9.7e-51 204.1 188 56.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.7e-50 203.4 154 62.3
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.1e-49 200.7 194 53.6
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.5e-48 195.7 157 60.5
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.5e-48 195.3 155 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.0e-47 194.1 188 53.2
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.0e-47 194.1 156 63.5
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 8.5e-47 191.0 157 62.4
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.2e-45 187.2 196 49.5
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 8.8e-44 181.0 158 58.2
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.8e-42 176.0 156 55.8
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 7.0e-41 171.4 197 47.2
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 4.5e-40 168.7 147 56.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.1e-38 164.1 202 48.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 6.1e-37 158.3 198 47.5
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.1e-33 145.6 132 57.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 7.7e-32 141.4 193 43.0
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 2.2e-26 123.2 193 40.4
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 5.4e-25 118.6 196 37.2
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 2.0e-24 116.7 193 38.3
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-23 114.0 80 70.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.9e-18 96.3 58 74.1
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.1e-06 57.8 92 44.6


User provided reference genes

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