Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 8.9e-64 246.9 136 100.0
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 2.2e-46 189.1 138 73.9
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 3.5e-44 181.8 132 81.8
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 1.8e-35 152.9 139 68.3
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 9.6e-34 147.1 140 68.6
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 1.6e-33 146.4 138 68.8
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 3.1e-32 142.1 140 66.4
Carub.0002s1776 Capsella rubella HOM05D007874 ORTHO05D009614 6.3e-25 117.9 136 58.8
C02p28490 Brassica napus HOM05D009085 ORTHO05D010299 1.2e-23 113.6 115 65.2
BolC2t08890H Brassica oleracea HOM05D009085 ORTHO05D010299 1.2e-23 113.6 115 65.2
BcaB03g14857 Brassica carinata HOM05D007874 ORTHO05D009614 1.4e-21 106.7 141 58.2
BraA07t31296Z Brassica rapa HOM05D007874 ORTHO05D009614 1.4e-21 106.7 140 58.6
BolC6t39564H Brassica oleracea HOM05D007874 ORTHO05D009614 1.9e-21 106.3 141 57.4
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 2.5e-21 105.9 146 45.2
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 9.4e-21 104.0 144 45.8
A07p37380 Brassica napus HOM05D007874 ORTHO05D009614 4.6e-20 101.7 140 57.1
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 3.0e-19 99.0 146 50.0
C06p45060 Brassica napus HOM05D007874 ORTHO05D009614 3.0e-19 99.0 146 54.8
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 6.7e-19 97.8 131 46.6
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 6.7e-19 97.8 131 46.6
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 6.7e-19 97.8 131 46.6
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 2.8e-17 92.4 99 56.6
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.0e-14 84.0 137 43.8
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 1.3e-14 83.6 143 42.0
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 1.9e-13 79.7 155 36.8
Carub.0001s2257 Capsella rubella HOM05D007874 ORTHO05D009614 3.2e-13 79.0 137 44.5
AL1G36620 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 7.2e-13 77.8 147 44.2
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 3.6e-12 75.5 133 36.8
Sp1g20500 Schrenkiella parvula HOM05D007874 ORTHO05D009614 7.9e-12 74.3 141 45.4
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 1.4e-11 73.6 139 41.7
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 3.0e-11 72.4 131 39.7
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 3.9e-11 72.0 136 44.1
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 8.8e-11 70.9 145 41.4
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 1.5e-10 70.1 137 40.9
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 2.6e-10 69.3 140 40.7
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 1.3e-09 67.0 139 37.4
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 1.3e-09 67.0 143 36.4
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 3.7e-09 65.5 137 34.3
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 3.7e-09 65.5 137 38.7
CARHR023430 Cardamine hirsuta HOM05D007874 ORTHO05D009614 1.4e-08 63.5 147 40.8
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 2.4e-08 62.8 141 39.0
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 1.2e-07 60.5 138 34.8
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 3.4e-07 58.9 163 35.0
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 1.0e-06 57.4 141 37.6
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 1.0e-06 57.4 144 36.1
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.7e-06 56.6 117 39.3
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 8.5e-06 54.3 108 35.2


User provided reference genes

Program Settings