Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G70150 Arabidopsis thaliana HOM05D001404 ORTHO05D009009 4.0e-231 804.3 375 100.0
AL2G29430 Arabidopsis lyrata HOM05D001404 ORTHO05D009009 3.9e-202 708.0 379 87.1
CARHR063240 Cardamine hirsuta HOM05D001404 ORTHO05D002309 1.9e-201 705.7 374 87.2
Carub.0002s1684 Capsella rubella HOM05D001404 ORTHO05D009009 1.2e-195 686.4 379 83.9
Thhalv10018717m.g Eutrema salsugineum HOM05D001404 ORTHO05D009009 1.3e-194 682.9 379 83.6
Sp5g25260 Schrenkiella parvula HOM05D001404 ORTHO05D009009 4.8e-192 674.5 379 82.1
BraA07t31231Z Brassica rapa HOM05D001404 ORTHO05D009009 8.2e-192 673.7 381 81.6
A07p36630 Brassica napus HOM05D001404 ORTHO05D009009 5.3e-191 671.0 381 81.6
C06p44030 Brassica napus HOM05D001404 ORTHO05D009009 3.5e-187 658.3 381 80.1
BolC6t39476H Brassica oleracea HOM05D001404 ORTHO05D009009 3.5e-187 658.3 381 80.1
Aa31LG4G10750 Aethionema arabicum HOM05D001404 ORTHO05D009009 1.2e-182 643.3 399 74.7
BcaC08g46464 Brassica carinata HOM05D001404 ORTHO05D009009 4.2e-180 634.8 384 77.9
THA.LOC104822951 Tarenaya hassleriana HOM05D001404 ORTHO05D009009 3.2e-164 582.0 381 71.4
Thecc.02G239700 Theobroma cacao HOM05D001404 ORTHO05D009009 2.0e-153 546.2 380 65.0
Duzib268G0371 Durio zibethinus HOM05D001404 ORTHO05D009009 3.1e-151 538.9 379 64.6
QL03p067270 Quercus lobata HOM05D001404 ORTHO05D009009 5.9e-150 534.6 377 63.9
TAR374G0908 Trochodendron aralioides HOM05D001404 ORTHO05D009009 3.8e-149 531.9 379 63.1
Ciclev10031837m.g Citrus clementina HOM05D001404 ORTHO05D009009 1.5e-148 530.0 381 64.0
Gohir.A03G143500 Gossypium hirsutum HOM05D001404 ORTHO05D009009 2.5e-148 529.3 381 63.5
CSS0043132 Camellia sinensis var. sinensis HOM05D001404 ORTHO05D002309 7.2e-148 527.7 382 63.1
Gorai.005G187100 Gossypium raimondii HOM05D001404 ORTHO05D009009 1.2e-147 526.9 381 63.5
CiPaw.05G145400 Carya illinoinensis HOM05D001404 ORTHO05D009009 2.1e-147 526.2 378 62.2
RcHm_v2.0_Chr4g0444821 Rosa chinensis HOM05D001404 ORTHO05D009009 2.7e-147 525.8 377 62.6
MD16G1084700 Malus domestica HOM05D001404 ORTHO05D009009 4.0e-146 521.9 377 62.1
Lalb_Chr05g0217271 Lupinus albus HOM05D001404 ORTHO05D009009 8.8e-146 520.8 376 62.8
Glyma.01G037400 Glycine max HOM05D001404 ORTHO05D009009 4.4e-145 518.5 382 62.3
Ca_24163_v3 Cicer arietinum L. HOM05D001404 ORTHO05D002309 1.3e-144 516.9 377 62.9
GSVIVG01020147001 Vitis vinifera HOM05D001404 ORTHO05D009009 1.7e-144 516.5 378 61.9
Lj2g0007192 Lotus japonicus HOM05D001404 ORTHO05D009009 3.7e-144 515.4 378 61.4
Prupe.1G261400 Prunus persica HOM05D001404 ORTHO05D009009 3.1e-143 512.3 377 60.5
Sc14g0008480 Simmondsia chinensis HOM05D001355 ORTHO05D003368 3.1e-143 512.3 378 60.6
Actinidia08188 Actinidia chinensis HOM05D001404 ORTHO05D009009 4.1e-143 511.9 381 61.9
FAN12G1952 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.2e-142 510.4 380 61.8
Manes.01G195300 Manihot esculenta HOM05D001404 ORTHO05D009009 1.2e-142 510.4 379 62.0
FAN07G0845 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.6e-142 510.0 385 61.0
COL.COLO4_36283 Corchorus olitorius HOM05D001404 ORTHO05D002309 2.7e-142 509.2 362 64.1
Psat2g112600 Pisum sativum HOM05D001404 ORTHO05D009009 5.9e-142 508.1 378 61.1
TWI36G0457 Tripterygium wilfordii HOM05D001404 ORTHO05D009009 1.3e-141 506.9 407 59.0
FvH4_4g35220 Fragaria vesca HOM05D001404 ORTHO05D009009 1.7e-141 506.5 386 61.1
FAN22G1682 Fragaria x ananassa HOM05D001404 ORTHO05D009009 2.5e-140 502.7 385 61.0
VMungo1215G3058 Vigna mungo HOM05D001404 ORTHO05D009009 2.5e-140 502.7 378 61.6
Potri.010G037600 Populus trichocarpa HOM05D001404 ORTHO05D009009 4.2e-140 501.9 387 60.2
Aqoxy3G00874 Aquilegia oxysepala HOM05D001404 ORTHO05D009009 2.1e-139 499.6 385 60.8
Medtr5g036470 Medicago truncatula HOM05D001404 ORTHO05D009009 3.6e-139 498.8 378 60.1
Oeu028546.1 Olea europaea HOM05D001404 ORTHO05D009009 2.3e-138 496.1 377 61.5
PGR119G0405 Punica granatum HOM05D001404 ORTHO05D009009 3.0e-138 495.7 377 59.9
Cpa.g.sc1960.1 Carica papaya HOM05D001404 ORTHO05D009009 1.2e-137 493.8 348 64.4
vmacro01204 Vaccinium macrocarpon HOM05D001404 ORTHO05D009009 3.4e-137 492.3 401 57.6
Sed0021588 Sechium edule HOM05D001404 ORTHO05D009009 7.5e-137 491.1 410 55.9
MSTRG.7858 Avicennia marina HOM05D001404 ORTHO05D009009 1.3e-136 490.3 382 59.4
CANSAT01G0136 Cannabis sativa HOM05D001404 ORTHO05D009009 3.7e-136 488.8 381 61.4
Cc11_g14260 Coffea canephora HOM05D001404 ORTHO05D009009 1.8e-135 486.5 378 59.8
Solyc05g006410.3 Solanum lycopersicum HOM05D001404 ORTHO05D009009 2.4e-135 486.1 378 58.5
Eucgr.B02570 Eucalyptus grandis HOM05D001404 ORTHO05D009009 3.1e-135 485.7 379 59.4
Sopen05g002340 Solanum pennellii HOM05D001404 ORTHO05D009009 5.4e-135 485.0 378 58.7
PGSC0003DMG401022613 Solanum tuberosum HOM05D001404 ORTHO05D009009 5.4e-135 485.0 378 59.0
SalBow2G3155 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.6e-134 483.4 378 57.9
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea HOM05D001404 ORTHO05D009009 2.0e-134 483.0 395 57.2
Lsat_1_v5_gn_4_6141 Lactuca sativa HOM05D001404 ORTHO05D009009 1.5e-132 476.9 361 59.0
Lj6A799T78 Lonicera japonica HOM05D001404 ORTHO05D009009 1.9e-132 476.5 383 57.7
HanXRQChr17g0570291 Helianthus annuus HOM05D001404 ORTHO05D009009 5.6e-132 474.9 378 57.4
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 7.3e-132 474.6 379 57.5
Rhsim12G0051800 Rhododendron simsii HOM05D001404 ORTHO05D009009 9.5e-132 474.2 472 50.8
CAN.G159.8 Capsicum annuum HOM05D001404 ORTHO05D009009 1.2e-131 473.8 378 57.4
Migut.L01385 Erythranthe guttata HOM05D001404 ORTHO05D009009 2.3e-130 469.5 377 58.1
PSO161G0115 Papaver somniferum HOM05D001404 ORTHO05D009009 2.3e-130 469.5 384 57.6
Peaxi162Scf00828g00020 Petunia axillaris HOM05D001404 ORTHO05D009009 2.2e-128 463.0 378 56.3
Hund25295 Selenicereus undatus HOM05D001404 ORTHO05D009009 3.7e-128 462.2 379 57.3
SalBow2G3257 Salvia bowleyana HOM05D001404 ORTHO05D009009 4.9e-128 461.8 378 56.1
ECA234G1431 Erigeron canadensis HOM05D001404 ORTHO05D002309 5.4e-127 458.4 377 56.5
Nitab4.5_0003602g0020 Nicotiana tabacum HOM05D001404 ORTHO05D009009 5.0e-125 451.8 420 51.2
SGA_v2.0_scaffold8G04270 Striga asiatica HOM05D001404 ORTHO05D009009 8.6e-125 451.1 389 55.8
Haze_12124 Corylus avellana HOM05D001404 ORTHO05D002309 1.9e-124 449.9 349 59.9
ClCG05G024960 Citrullus lanatus HOM05D001404 ORTHO05D009009 3.3e-124 449.1 351 58.1
EL10Ac6g13111 Beta vulgaris HOM05D001404 ORTHO05D009009 3.6e-123 445.7 379 54.1
CDE10G0936 Ceratophyllum demersum HOM05D001404 ORTHO05D009009 1.7e-120 436.8 381 54.9
Nn4g22934 Nelumbo nucifera HOM05D001404 ORTHO05D009009 2.9e-120 436.0 345 58.6
Os07g0481000 Oryza sativa ssp. japonica HOM05D001404 ORTHO05D009009 2.4e-119 433.0 378 52.9
Gohir.D02G166800 Gossypium hirsutum HOM05D001404 ORTHO05D009009 4.9e-112 408.7 309 61.5
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea HOM05D001404 ORTHO05D009009 1.3e-109 400.6 381 51.2
TPR.G17319 Trifolium pratense HOM05D001404 ORTHO05D009009 1.7e-109 400.2 354 54.0
CsaV3_5G031930 Cucumis sativus L. HOM05D001404 ORTHO05D009009 3.0e-109 399.4 310 57.7
Nitab4.5_0002312g0090 Nicotiana tabacum HOM05D001404 ORTHO05D009009 1.1e-108 397.5 334 55.4
Sabra10G0028400 Salix brachista HOM05D001404 ORTHO05D009009 3.1e-106 389.4 322 55.9
Zm00001eb321400 Zea mays HOM05D001404 ORTHO05D009009 2.7e-102 376.3 380 48.2
Dinv24916 Davidia involucrata HOM05D001404 ORTHO05D009009 8.7e-101 371.3 274 61.7
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis HOM05D001404 ORTHO05D009009 6.2e-99 365.2 393 47.1
AUR62026309 Chenopodium quinoa HOM05D001404 ORTHO05D009009 3.4e-97 359.4 387 47.5
Phvul.002G076800 Phaseolus vulgaris HOM05D001404 ORTHO05D009009 2.7e-94 349.7 284 57.4
Mapoly0056s0134 Marchantia polymorpha HOM05D001404 ORTHO05D009009 2.8e-91 339.7 374 42.8
FAN17G2278 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.1e-90 337.8 249 61.4
HPP92_002468 Vanilla planifolia HOM05D001404 ORTHO05D009009 3.4e-89 332.8 309 54.4
Glyma.02G027500 Glycine max HOM05D001404 ORTHO05D009009 2.9e-88 329.7 262 58.8
unitig_749.g13260 Utricularia gibba HOM05D001404 ORTHO05D009009 8.1e-83 311.6 398 41.2
Lj4g0012021 Lotus japonicus HOM05D001404 ORTHO05D009009 1.1e-82 311.2 378 42.6
Pp3c9_21180 Physcomitrium patens HOM05D001404 ORTHO05D009009 2.2e-80 303.5 381 40.2
SMO238G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 1.5e-76 290.8 355 43.4
SalBow2G0480 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.4e-74 284.3 304 47.4
SMO091G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 5.3e-74 282.3 376 39.6
ATR0712G045 Amborella trichopoda HOM05D001404 ORTHO05D009009 1.8e-69 267.3 217 57.1
CBR_g72156 Chara braunii HOM05D001404 ORTHO05D009009 6.1e-54 215.7 297 38.4
AUR62026503 Chenopodium quinoa HOM05D001404 ORTHO05D009009 5.9e-41 172.6 233 44.6
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 2.9e-40 170.2 372 29.8
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.5e-39 167.9 372 29.6
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 5.5e-39 166.0 372 28.8
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 9.4e-39 165.2 381 30.4
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.2e-38 164.9 372 29.3
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 1.6e-38 164.5 371 31.0
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 2.7e-38 163.7 376 30.3
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 2.7e-38 163.7 374 31.3
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 3.6e-38 163.3 378 30.2
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 3.6e-38 163.3 371 30.5
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 4.7e-38 162.9 374 30.5
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 4.7e-38 162.9 373 30.8
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 1.0e-37 161.8 370 29.7
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 1.4e-37 161.4 370 30.0
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.8e-37 161.0 380 29.5
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 2.3e-37 160.6 374 28.3
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 2.3e-37 160.6 373 27.6
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 3.0e-37 160.2 379 28.0
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 3.0e-37 160.2 373 28.2
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 3.0e-37 160.2 380 29.2
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 4.0e-37 159.8 380 29.5
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 5.2e-37 159.5 371 27.5
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 5.2e-37 159.5 371 29.1
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 5.2e-37 159.5 371 27.5
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 5.2e-37 159.5 375 29.9
AagrBONN_evm.TU.Sc2ySwM_117.3431 Anthoceros agrestis HOM05D001404 ORTHO05D009009 1.2e-36 158.3 149 47.7
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.5e-36 157.9 374 29.4
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.5e-36 157.9 374 29.4
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 3.4e-36 156.8 369 29.8
Atru.chr11.1937 Acer truncatum HOM05D001404 ORTHO05D002309 5.7e-36 156.0 112 61.6
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 5.7e-36 156.0 376 28.7
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 7.5e-36 155.6 374 29.4
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 7.5e-36 155.6 374 29.7
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 7.5e-36 155.6 374 29.7
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 7.5e-36 155.6 372 30.1
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.3e-35 154.8 374 29.1
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 1.3e-35 154.8 380 29.5
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 1.7e-35 154.5 374 29.9
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 2.2e-35 154.1 374 29.1
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 2.8e-35 153.7 358 29.9
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 3.7e-35 153.3 366 29.2
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 4.8e-35 152.9 374 28.6
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 6.3e-35 152.5 374 28.3
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 8.3e-35 152.1 372 29.6
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 8.3e-35 152.1 374 28.6
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 8.3e-35 152.1 374 29.1
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 8.3e-35 152.1 374 29.4
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 1.1e-34 151.8 374 28.3
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 1.4e-34 151.4 374 28.9
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 1.8e-34 151.0 374 29.7
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 2.4e-34 150.6 370 28.9
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 4.1e-34 149.8 373 29.2
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 7.0e-34 149.1 371 29.6
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 5.9e-33 146.0 372 28.2
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 5.9e-33 146.0 380 28.7
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 7.7e-33 145.6 380 27.6
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.3e-32 144.8 381 28.6
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.7e-32 144.4 373 27.3
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 1.0e-29 135.2 371 26.1
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 3.0e-29 133.7 372 26.1
SalBow7G1134 Salvia bowleyana HOM05D001404 ORTHO05D009009 3.4e-28 130.2 125 48.8
SEGI_39493 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 4.9e-27 126.3 133 46.6
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 2.0e-25 120.9 245 31.8
ATR0712G115 Amborella trichopoda HOM05D001404 ORTHO05D009009 4.5e-25 119.8 72 73.6
MCO10G058 Micromonas commoda HOM05D001404 ORTHO05D009009 1.3e-24 118.2 449 24.5
MD13G1085400 Malus domestica HOM05D001404 ORTHO05D009009 2.9e-24 117.1 86 65.1
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 8.6e-24 115.5 372 24.2
SEGI_25303 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 2.1e-22 110.9 135 40.7
TPR.G17205 Trifolium pratense HOM05D001404 ORTHO05D009009 6.1e-22 109.4 73 63.0
SEGI_33690 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 1.4e-21 108.2 129 41.9
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 5.2e-21 106.3 299 28.8
Lalb_Chr15g0087511 Lupinus albus HOM05D007895 ORTHO05D010017 1.7e-16 91.3 198 32.3
Duzib251G0488 Durio zibethinus HOM05D001404 ORTHO05D009009 4.3e-15 86.7 64 56.2
Lsat_1_v5_gn_1_78741 Lactuca sativa HOM05D000538 ORTHO05D009009 1.4e-13 81.6 75 46.7
HanXRQChr17g0570121 Helianthus annuus HOM05D001404 ORTHO05D009009 1.8e-13 81.3 82 46.3
Lalb_Chr15g0087501 Lupinus albus HOM05D007895 ORTHO05D010017 1.1e-10 72.0 122 34.4
C06p36300 Brassica napus HOM05D001404 ORTHO05D009009 1.4e-10 71.6 51 66.7
Duzib160G0114 Durio zibethinus HOM05D007895 ORTHO05D010017 1.4e-10 71.6 191 25.1
Medtr5g036455 Medicago truncatula HOM05D001404 ORTHO05D009009 3.2e-10 70.5 71 52.1
Lsat_1_v5_gn_1_40080 Lactuca sativa HOM05D000207 ORTHO05D000191 1.5e-07 61.6 62 46.8
MELO3C012030.2 Cucumis melo HOM05D001404 ORTHO05D009009 9.5e-07 58.9 35 68.6
Oeu048569.1 Olea europaea HOM05D000240 ORTHO05D002608 2.1e-06 57.8 52 50.0


User provided reference genes

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