Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G68765 Arabidopsis thaliana HOM05D010485 ORTHO05D010245 9.1e-37 156.4 78 100.0
AL2G27710 Arabidopsis lyrata HOM05D010485 ORTHO05D010245 2.7e-28 128.3 78 83.3
Thhalv10019748m.g Eutrema salsugineum HOM05D010485 ORTHO05D010245 8.0e-25 116.7 80 81.2
CARHR061590 Cardamine hirsuta HOM05D010485 ORTHO05D010245 6.8e-24 113.6 78 75.6
Carub.0002s1533 Capsella rubella HOM05D010485 ORTHO05D010245 5.7e-23 110.5 80 78.8
Sp5g23880 Schrenkiella parvula HOM05D010485 ORTHO05D010245 1.7e-22 109.0 78 78.2
BcaC08g46326 Brassica carinata HOM05D010485 ORTHO05D010245 6.3e-22 107.1 79 79.7
A07p35150 Brassica napus HOM05D010485 ORTHO05D010245 6.3e-22 107.1 79 79.7
C06p41120 Brassica napus HOM05D010485 ORTHO05D010245 6.3e-22 107.1 79 79.7
BolC6t39313H Brassica oleracea HOM05D010485 ORTHO05D010245 6.3e-22 107.1 79 79.7
BraA07t31108Z Brassica rapa HOM05D010485 ORTHO05D010245 6.3e-22 107.1 79 79.7
BcaC03g14985 Brassica carinata HOM05D010485 ORTHO05D010245 1.6e-20 102.4 78 73.1
C02p25180 Brassica napus HOM05D010485 ORTHO05D010245 1.6e-20 102.4 78 73.1
BolC2t08597H Brassica oleracea HOM05D010485 ORTHO05D010245 1.6e-20 102.4 78 73.1
A02p15330 Brassica napus HOM05D010485 ORTHO05D010245 2.7e-20 101.7 78 71.8
BraA02t06594Z Brassica rapa HOM05D010485 ORTHO05D010245 2.7e-20 101.7 78 71.8
C04p37640 Brassica napus HOM05D010485 ORTHO05D010245 5.9e-20 100.5 78 71.8
BolC4t25334H Brassica oleracea HOM05D010485 ORTHO05D010245 5.9e-20 100.5 78 71.8
BcaB05g24410 Brassica carinata HOM05D010485 ORTHO05D010245 1.0e-19 99.8 78 69.2
BcaB03g15847 Brassica carinata HOM05D010485 ORTHO05D010245 2.9e-19 98.2 79 75.9
Aa31sc79G20 Aethionema arabicum HOM05D010485 ORTHO05D010245 4.9e-14 80.9 74 62.2
Glyma.10G205400 Glycine max HOM05D008579 ORTHO05D010245 2.6e-07 58.5 84 44.0
MELO3C012204.2 Cucumis melo HOM05D008579 ORTHO05D010245 3.4e-07 58.2 57 54.4
Glyma.20G185000 Glycine max HOM05D008579 ORTHO05D010245 5.8e-07 57.4 84 42.9
Glyma.01G090400 Glycine max HOM05D008579 ORTHO05D010245 1.7e-06 55.8 84 42.9
Phvul.007G101400 Phaseolus vulgaris HOM05D008579 ORTHO05D010245 2.2e-06 55.5 81 39.5
Prupe.1G303500 Prunus persica HOM05D008579 ORTHO05D010245 2.2e-06 55.5 90 37.8
Peaxi162Scf00367g00073 Petunia axillaris HOM05D022312 ORTHO05D014564 4.9e-06 54.3 51 52.9
Haze_17414 Corylus avellana HOM05D008579 ORTHO05D010245 6.4e-06 53.9 81 43.2
Potri.010G131500 Populus trichocarpa HOM05D008579 ORTHO05D010245 6.4e-06 53.9 77 41.6
Thecc.02G363200 Theobroma cacao HOM05D008579 ORTHO05D010245 6.4e-06 53.9 76 40.8
CsaV3_5G033860 Cucumis sativus L. HOM05D008579 ORTHO05D010245 8.3e-06 53.5 63 47.6


User provided reference genes

Program Settings