Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 4.6e-35 151.0 94 100.0
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 5.6e-25 117.5 94 78.7
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 1.4e-23 112.8 94 60.6
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 1.4e-23 112.8 94 60.6
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 1.4e-23 112.8 94 60.6
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 5.3e-23 110.9 94 68.1
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 7.6e-22 107.1 47 95.7
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.7e-21 105.9 94 71.3
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 6.5e-21 104.0 52 82.7
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 1.4e-20 102.8 52 80.8
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 3.2e-20 101.7 52 80.8
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 2.7e-19 98.6 94 69.1
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 4.6e-19 97.8 52 76.9
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 4.6e-19 97.8 52 76.9
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 4.6e-19 97.8 52 76.9
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 6.0e-19 97.4 48 83.3
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 7.9e-19 97.1 52 76.9
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 2.2e-16 89.0 47 72.3
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 1.1e-15 86.7 47 72.3
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 2.2e-13 79.0 49 71.4
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 5.0e-13 77.8 45 64.4
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 6.5e-13 77.4 52 63.5
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.2e-12 75.1 52 63.5
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 2.1e-11 72.4 46 56.5
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 4.6e-11 71.2 43 60.5
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 6.1e-11 70.9 43 62.8
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 7.9e-11 70.5 45 55.6
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 7.9e-11 70.5 43 60.5
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 1.8e-10 69.3 48 56.2
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 1.8e-10 69.3 45 60.0
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 5.1e-10 67.8 47 55.3
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 6.7e-10 67.4 42 69.0
BcaB03g14042 Brassica carinata HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
BcaC06g35205 Brassica carinata HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
A07p12600 Brassica napus HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
C07p18700 Brassica napus HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
BolC7t42380H Brassica oleracea HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
BraA07t29038Z Brassica rapa HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 62.5
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 8.8e-10 67.0 48 52.1
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 1.1e-09 66.6 47 46.8
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 1.1e-09 66.6 48 56.2
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 1.1e-09 66.6 42 57.1
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 2.0e-09 65.9 45 55.6
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 2.0e-09 65.9 45 53.3
BcaC05g26671 Brassica carinata HOM05D007757 ORTHO05D009619 3.3e-09 65.1 48 58.3
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 3.3e-09 65.1 46 54.3
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 3.3e-09 65.1 45 57.8
Sp1g22790 Schrenkiella parvula HOM05D007757 ORTHO05D009619 3.3e-09 65.1 55 54.5
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 5.7e-09 64.3 48 54.2
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 7.4e-09 63.9 46 52.2
BcaC05g26463 Brassica carinata HOM05D007757 ORTHO05D009619 9.7e-09 63.5 48 58.3
A09p39320 Brassica napus HOM05D007757 ORTHO05D009619 9.7e-09 63.5 48 58.3
C05p25050 Brassica napus HOM05D007757 ORTHO05D009619 9.7e-09 63.5 48 58.3
BolC5t31238H Brassica oleracea HOM05D007757 ORTHO05D009619 9.7e-09 63.5 48 58.3
BraA09t39435Z Brassica rapa HOM05D007757 ORTHO05D009619 9.7e-09 63.5 48 58.3
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 9.7e-09 63.5 45 46.7
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 1.7e-08 62.8 40 55.0
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 1.7e-08 62.8 45 51.1
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 2.2e-08 62.4 48 52.1
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 2.8e-08 62.0 43 46.5
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 3.7e-08 61.6 44 47.7
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 4.8e-08 61.2 46 50.0
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 4.8e-08 61.2 46 50.0
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 6.3e-08 60.8 46 52.2
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 6.3e-08 60.8 51 49.0
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 1.1e-07 60.1 41 48.8
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 1.1e-07 60.1 40 52.5
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 1.4e-07 59.7 46 43.5
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 1.4e-07 59.7 41 48.8
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 1.4e-07 59.7 50 50.0
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 1.8e-07 59.3 40 50.0
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 2.4e-07 58.9 44 47.7
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 2.4e-07 58.9 40 50.0
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 4.1e-07 58.2 39 56.4
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 5.3e-07 57.8 39 53.8
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 5.3e-07 57.8 39 53.8
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 5.3e-07 57.8 39 53.8
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 5.3e-07 57.8 46 45.7
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 5.3e-07 57.8 46 45.7
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 6.9e-07 57.4 39 53.8
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 1.2e-06 56.6 44 47.7
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 5.9e-06 54.3 46 52.2


User provided reference genes

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