Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 5.3e-125 451.1 232 100.0
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 5.5e-122 441.0 232 97.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 5.5e-122 441.0 232 97.0
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.5e-114 416.4 230 93.0
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.5e-114 416.4 230 93.0
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 4.7e-113 411.4 230 91.7
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 6.1e-113 411.0 230 92.2
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 2.3e-112 409.1 235 90.2
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 3.0e-112 408.7 230 92.2
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 3.0e-112 408.7 230 92.2
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 5.2e-112 407.9 230 91.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 6.7e-112 407.5 230 92.2
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 6.7e-112 407.5 230 92.2
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.1e-109 400.2 259 82.6
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 8.0e-105 384.0 231 84.8
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 2.8e-94 349.0 235 77.9
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.0e-91 340.5 233 74.7
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.1e-90 337.0 231 75.3
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 9.5e-90 334.0 231 75.8
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.2e-89 333.6 227 76.2
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.6e-89 333.2 237 75.9
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 2.8e-89 332.4 236 73.3
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.0e-88 330.5 234 74.4
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 5.2e-88 328.2 230 72.6
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 3.4e-87 325.5 224 74.6
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 3.4e-87 325.5 231 74.0
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 4.4e-87 325.1 231 72.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 9.8e-87 323.9 231 73.2
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 4.9e-86 321.6 231 73.6
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 1.1e-85 320.5 235 72.3
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.1e-85 320.5 235 72.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.4e-85 320.1 230 71.7
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.8e-85 319.7 235 71.1
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.4e-85 319.3 235 73.2
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 2.4e-85 319.3 233 71.7
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.2e-85 318.9 235 73.2
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 3.2e-85 318.9 233 73.0
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.1e-85 318.5 239 71.1
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 5.4e-85 318.2 229 72.1
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 5.4e-85 318.2 232 71.6
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.6e-84 316.6 231 71.9
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-84 316.6 235 72.8
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.0e-84 316.2 238 73.9
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.0e-84 316.2 234 70.9
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 4.6e-84 315.1 234 71.8
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.0e-83 313.9 231 69.7
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.7e-83 313.2 242 69.4
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 3.0e-83 312.4 232 70.7
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 3.0e-83 312.4 231 71.4
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 3.0e-83 312.4 235 71.5
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 5.0e-83 311.6 228 71.9
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 6.6e-83 311.2 227 71.4
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.5e-82 310.1 233 70.8
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 1.9e-82 309.7 224 69.6
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 2.5e-82 309.3 231 70.6
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 4.3e-82 308.5 236 68.6
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 9.5e-82 307.4 230 71.7
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 9.5e-82 307.4 234 67.9
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.7e-81 305.1 233 68.7
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 4.7e-81 305.1 233 69.1
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.4e-80 303.5 236 69.5
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.4e-80 303.5 233 69.1
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 8.9e-80 300.8 235 69.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.3e-78 297.0 232 67.7
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 8.3e-78 294.3 183 79.2
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.9e-77 293.1 238 70.2
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 3.2e-77 292.4 200 74.0
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 3.2e-77 292.4 233 67.0
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.6e-76 290.0 233 66.5
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 3.5e-76 288.9 235 67.7
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 2.3e-75 286.2 209 70.8
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 3.9e-75 285.4 237 65.4
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 3.3e-74 282.3 238 68.1
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.3e-74 282.0 237 65.8
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 1.4e-72 276.9 233 63.5
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.2e-72 275.0 230 62.6
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 5.2e-72 275.0 206 68.0
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 3.4e-71 272.3 240 60.4
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 3.4e-71 272.3 239 63.6
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 7.5e-71 271.2 231 64.5
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 4.9e-70 268.5 232 62.9
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 7.1e-69 264.6 172 75.0
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 9.2e-69 264.2 230 62.2
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 1.7e-67 260.0 234 59.4
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.5e-66 254.2 223 60.5
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.4e-64 250.4 235 58.7
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 7.6e-63 244.6 231 60.6
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.8e-62 242.3 230 54.8
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 7.1e-61 238.0 167 70.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 9.2e-61 237.7 233 58.4
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 1.7e-59 233.4 225 57.8
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 1.5e-58 230.3 194 61.3
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 2.5e-58 229.6 194 63.4
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 3.6e-57 225.7 142 76.8
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 5.2e-56 221.9 125 92.8
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 9.0e-56 221.1 142 77.5
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 5.8e-55 218.4 139 77.7
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 3.8e-54 215.7 139 76.3
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 5.8e-47 191.8 138 73.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 9.3e-45 184.5 229 50.2
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.3e-43 180.6 208 47.1
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.3e-43 179.9 95 86.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 1.6e-41 173.7 229 48.5
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 3.7e-41 172.6 192 47.4
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 8.1e-41 171.4 192 50.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.9e-38 162.9 177 46.3
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.7e-36 156.4 140 63.6
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 2.7e-36 156.4 134 62.7
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.6e-33 147.1 177 41.8
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 3.2e-29 132.9 159 44.0
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 3.3e-26 122.9 230 38.7
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 8.2e-25 118.2 92 69.6
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.5e-18 97.4 57 86.0
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.1e-16 91.3 91 58.2
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 1.0e-11 74.7 142 26.1
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 6.7e-11 72.0 234 29.1
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 8.8e-11 71.6 174 26.4


User provided reference genes

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