Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G67670 Arabidopsis thaliana HOM05D008421 ORTHO05D010563 4.0e-22 107.5 65 100.0
AL2G26370 Arabidopsis lyrata HOM05D008421 ORTHO05D010563 1.5e-21 105.5 65 98.5
Carub.0002s1405 Capsella rubella HOM05D008421 ORTHO05D010563 1.6e-18 95.5 66 89.4
BcaB03g15178 Brassica carinata HOM05D008421 ORTHO05D010563 1.4e-14 82.4 65 84.6
THA.LOC104825525 Tarenaya hassleriana HOM05D008421 ORTHO05D010563 2.9e-12 74.7 65 80.0
Cpa.g.sc233.16 Carica papaya HOM05D008421 ORTHO05D010563 3.8e-12 74.3 65 58.5
BcaC08g46175 Brassica carinata HOM05D008421 ORTHO05D010563 5.0e-12 73.9 65 63.1
A07p34180 Brassica napus HOM05D008421 ORTHO05D010563 5.0e-12 73.9 65 63.1
C06p42590 Brassica napus HOM05D008421 ORTHO05D010563 5.0e-12 73.9 65 63.1
BolC6t39180H Brassica oleracea HOM05D008421 ORTHO05D010563 5.0e-12 73.9 65 63.1
BraA07t31047Z Brassica rapa HOM05D008421 ORTHO05D010563 5.0e-12 73.9 65 63.1
BcaC01g01643 Brassica carinata HOM05D008421 ORTHO05D010563 1.4e-11 72.4 63 61.9
Aa31LG4G12080 Aethionema arabicum HOM05D008421 ORTHO05D010563 2.5e-11 71.6 65 76.9
Haze_12336 Corylus avellana HOM05D002802 ORTHO05D003166 2.5e-11 71.6 66 54.5
Cfa009304 Carpinus fangiana HOM05D008421 ORTHO05D010563 6.1e-10 67.0 66 69.7
Duzib268G0643 Durio zibethinus HOM05D008421 ORTHO05D010563 7.9e-10 66.6 64 56.2
Sp1g23390 Schrenkiella parvula HOM05D008421 ORTHO05D010563 1.0e-09 66.2 65 76.9
Glyma.11G247200 Glycine max HOM05D008421 ORTHO05D010563 1.3e-09 65.9 65 53.8
VMungo1383G0937 Vigna mungo HOM05D008421 ORTHO05D010563 3.9e-09 64.3 64 53.1
Phvul.001G258600 Phaseolus vulgaris HOM05D008421 ORTHO05D010563 1.1e-08 62.8 62 51.6
Duzib251G0144 Durio zibethinus HOM05D008421 ORTHO05D010563 1.9e-08 62.0 64 64.1
Lj6g0026102 Lotus japonicus HOM05D008421 ORTHO05D010563 1.9e-08 62.0 65 53.8
TWI18G0980 Tripterygium wilfordii HOM05D008421 ORTHO05D010563 1.9e-08 62.0 65 47.7
Prupe.1G235000 Prunus persica HOM05D008421 ORTHO05D010563 1.3e-07 59.3 64 62.5
AL1G40530 Arabidopsis lyrata HOM05D008421 ORTHO05D010563 1.6e-07 58.9 65 73.8
Carub.0001s2569 Capsella rubella HOM05D008421 ORTHO05D010563 1.6e-07 58.9 65 73.8
Lalb_Chr23g0277861 Lupinus albus HOM05D008421 ORTHO05D010563 2.8e-07 58.2 65 50.8
Manes.12G016200 Manihot esculenta HOM05D008421 ORTHO05D010563 4.8e-07 57.4 64 64.1
ClCG05G026270 Citrullus lanatus HOM05D004675 ORTHO05D005631 6.3e-07 57.0 66 71.2
MELO3C011896.2 Cucumis melo HOM05D008421 ORTHO05D010563 8.2e-07 56.6 66 68.2
AT1G24405 Arabidopsis thaliana HOM05D008421 ORTHO05D010563 1.1e-06 56.2 65 72.3
CANSAT01G2749 Cannabis sativa HOM05D008421 ORTHO05D010563 1.1e-06 56.2 65 60.0
CiPaw.05G173400 Carya illinoinensis HOM05D008421 ORTHO05D010563 1.4e-06 55.8 65 56.9
Gohir.D12G151600 Gossypium hirsutum HOM05D008421 ORTHO05D010563 2.4e-06 55.1 64 56.2
BcaC05g26723 Brassica carinata HOM05D008421 ORTHO05D010563 3.1e-06 54.7 65 73.8
Glyma.18G010100 Glycine max HOM05D008421 ORTHO05D010563 3.1e-06 54.7 66 50.0
Gorai.008G163100 Gossypium raimondii HOM05D008421 ORTHO05D010563 5.3e-06 53.9 64 62.5
BcaC05g26528 Brassica carinata HOM05D008421 ORTHO05D010563 6.9e-06 53.5 65 72.3
A09p38740 Brassica napus HOM05D008421 ORTHO05D010563 6.9e-06 53.5 65 72.3
C05p25860 Brassica napus HOM05D008421 ORTHO05D010563 6.9e-06 53.5 65 72.3
BolC5t31306H Brassica oleracea HOM05D008421 ORTHO05D010563 6.9e-06 53.5 65 72.3
BraA09t39382Z Brassica rapa HOM05D008421 ORTHO05D010563 6.9e-06 53.5 65 72.3
CARHR026720 Cardamine hirsuta HOM05D008421 ORTHO05D010563 9.0e-06 53.1 63 71.4
Medtr3g085970 Medicago truncatula HOM05D008421 ORTHO05D010563 9.0e-06 53.1 65 55.4


User provided reference genes

Program Settings