Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 5.7e-184 647.5 339 100.0
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 4.0e-145 518.5 325 84.9
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 6.8e-105 384.8 320 64.1
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 5.6e-99 365.2 321 62.0
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 9.0e-97 357.8 336 60.1
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 3.3e-91 339.3 313 58.8
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 4.3e-91 339.0 336 56.5
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 2.6e-88 329.7 325 56.6
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 4.5e-88 328.9 325 56.6
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 7.6e-88 328.2 325 56.6
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 2.2e-87 326.6 327 56.3
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 5.3e-33 146.0 301 36.2
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 1.1e-30 138.3 146 56.8
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.4e-17 92.8 268 29.5
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.2e-17 92.0 298 29.5
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.3e-15 87.4 255 31.4
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-14 85.1 263 31.6
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-14 84.7 252 32.5
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.9e-14 84.3 255 31.4
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.9e-14 84.3 261 29.9
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.3e-14 82.4 293 29.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 2.1e-13 80.9 306 28.1
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.8e-13 80.5 278 29.5
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.6e-13 80.1 310 28.7
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.7e-13 79.7 303 24.8
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.8e-12 77.8 257 29.6
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 3.1e-12 77.0 234 27.4
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.0e-12 76.6 251 31.9
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 4.0e-12 76.6 234 27.4
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 8.9e-12 75.5 314 27.1
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 8.9e-12 75.5 204 27.9
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.2e-11 75.1 226 25.7
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-11 74.7 263 29.3
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.5e-11 74.7 286 26.2
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.4e-11 73.2 302 26.8
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 1.9e-09 67.8 265 26.8
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 7.8e-08 62.4 266 25.2
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 6.6e-07 59.3 236 28.4
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 6.6e-07 59.3 133 33.1


User provided reference genes

Program Settings