Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 9.3e-47 189.9 98 100.0
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 2.4e-34 148.7 81 92.6
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 3.8e-32 141.4 81 87.7
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 7.7e-25 117.1 85 76.5
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 5.0e-24 114.4 85 75.3
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 8.5e-24 113.6 82 74.4
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 2.1e-22 109.0 82 70.7
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 2.7e-22 108.6 82 70.7
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 4.8e-19 97.8 70 72.9
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 4.1e-18 94.7 83 66.3
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 2.0e-17 92.4 83 65.1
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 1.7e-16 89.4 51 92.2
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 3.0e-13 78.6 89 53.9
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.5e-12 76.3 88 58.0
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 4.4e-12 74.7 91 52.7
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 5.7e-12 74.3 92 52.2
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 7.5e-12 73.9 88 56.8
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 9.8e-12 73.6 94 56.4
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 3.7e-11 71.6 88 55.7
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 4.8e-11 71.2 89 53.9
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 6.3e-11 70.9 92 51.1
AL2G22380 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 5.4e-10 67.8 84 57.1
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 9.1e-10 67.0 88 50.0
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 1.2e-09 66.6 89 49.4
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 1.6e-09 66.2 77 53.2
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 5.9e-09 64.3 87 49.4
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 5.9e-09 64.3 78 53.8
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 5.9e-09 64.3 86 50.0
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.3e-08 63.2 91 49.5
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 6.5e-08 60.8 88 54.5
Sp5g20410 Schrenkiella parvula HOM05D009162 ORTHO05D012456 6.5e-08 60.8 81 49.4
Carub.0002s1126 Capsella rubella HOM05D009162 ORTHO05D012456 1.5e-07 59.7 44 75.0
Carub.0002s1131 Capsella rubella HOM05D009162 ORTHO05D012456 1.6e-06 56.2 76 48.7


User provided reference genes

Program Settings