Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G64770 Arabidopsis thaliana HOM05D003255 ORTHO05D003705 1.4e-207 726.1 368 100.0
AL2G19130 Arabidopsis lyrata HOM05D003255 ORTHO05D003705 2.4e-148 529.3 286 95.8
Carub.0002s0974 Capsella rubella HOM05D003255 ORTHO05D003705 1.4e-143 513.5 287 92.0
CARHR287400 Cardamine hirsuta HOM05D003255 ORTHO05D003705 7.1e-140 501.1 286 89.9
BraA06t27695Z Brassica rapa HOM05D003255 ORTHO05D003705 2.7e-139 499.2 368 74.5
A06p48260 Brassica napus HOM05D003255 ORTHO05D003705 3.5e-139 498.8 368 74.2
Thhalv10018808m.g Eutrema salsugineum HOM05D003255 ORTHO05D003705 2.9e-133 479.2 285 86.7
Sp2g07380 Schrenkiella parvula HOM05D003255 ORTHO05D003705 1.5e-129 466.8 280 87.1
BcaC06g31750 Brassica carinata HOM05D003255 ORTHO05D003705 2.0e-126 456.4 294 82.3
Aa31LG2G1910 Aethionema arabicum HOM05D003255 ORTHO05D003705 1.5e-121 440.3 287 78.4
BcaC02g10774 Brassica carinata HOM05D003255 ORTHO05D003705 6.9e-119 431.4 294 77.9
C04p25200 Brassica napus HOM05D003255 ORTHO05D003705 6.9e-119 431.4 294 77.9
BolC4t24025H Brassica oleracea HOM05D003255 ORTHO05D003705 6.9e-119 431.4 294 77.9
THA.LOC104805763 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 1.5e-118 430.3 295 75.3
Carub.0002s0972 Capsella rubella HOM05D003255 ORTHO05D003705 2.1e-115 419.9 284 79.6
COL.COLO4_13607 Corchorus olitorius HOM05D003255 ORTHO05D003705 1.1e-103 380.9 291 64.3
Thecc.05G293900 Theobroma cacao HOM05D003255 ORTHO05D003705 1.1e-103 380.9 292 64.0
Cpa.g.sc51.109 Carica papaya HOM05D003255 ORTHO05D003705 4.1e-103 379.0 292 64.4
Gorai.007G288700 Gossypium raimondii HOM05D003255 ORTHO05D003705 1.5e-102 377.1 295 64.7
Manes.09G141900 Manihot esculenta HOM05D003255 ORTHO05D003705 2.0e-102 376.7 290 66.9
Gohir.D11G268900 Gossypium hirsutum HOM05D003255 ORTHO05D003705 7.7e-102 374.8 295 64.7
Gohir.A11G258800 Gossypium hirsutum HOM05D003255 ORTHO05D003705 2.9e-101 372.9 295 64.1
CiPaw.10G000800 Carya illinoinensis HOM05D003255 ORTHO05D003705 1.1e-97 360.9 294 62.2
Cfa016436 Carpinus fangiana HOM05D003255 ORTHO05D003705 4.4e-97 359.0 294 62.2
Haze_19413 Corylus avellana HOM05D003255 ORTHO05D003705 5.7e-97 358.6 295 63.1
Ciclev10020997m.g Citrus clementina HOM05D003255 ORTHO05D003705 1.1e-95 354.4 290 63.4
MD17G1264700 Malus domestica HOM05D003255 ORTHO05D003705 2.4e-95 353.2 291 61.2
Duzib128G1885 Durio zibethinus HOM05D003255 ORTHO05D003705 3.1e-95 352.8 295 60.7
Dinv14582 Davidia involucrata HOM05D003255 ORTHO05D003705 7.0e-95 351.7 290 61.4
Atru.chr2.1363 Acer truncatum HOM05D003255 ORTHO05D003705 1.7e-93 347.1 297 60.9
Prupe.3G114100 Prunus persica HOM05D003255 ORTHO05D003705 2.2e-93 346.7 299 59.2
PGR142G0348 Punica granatum HOM05D003255 ORTHO05D003705 3.6e-91 339.3 301 59.8
RcHm_v2.0_Chr2g0130821 Rosa chinensis HOM05D003255 ORTHO05D003705 1.8e-90 337.0 293 58.4
Potri.019G034100 Populus trichocarpa HOM05D003255 ORTHO05D003705 6.7e-90 335.1 295 58.6
Sabra19G0042000 Salix brachista HOM05D003255 ORTHO05D003705 2.0e-89 333.6 294 57.5
QL07p019702 Quercus lobata HOM05D003255 ORTHO05D003705 3.3e-89 332.8 297 60.3
FvH4_6g27680 Fragaria vesca HOM05D003255 ORTHO05D003705 9.7e-89 331.3 296 57.8
FAN05G4616 Fragaria x ananassa HOM05D003255 ORTHO05D003705 9.7e-89 331.3 296 57.8
FAN09G1185 Fragaria x ananassa HOM05D003255 ORTHO05D003705 9.7e-89 331.3 296 57.8
FAN14G1820 Fragaria x ananassa HOM05D003255 ORTHO05D003705 9.7e-89 331.3 296 57.8
GSVIVG01033393001 Vitis vinifera HOM05D003255 ORTHO05D003705 2.8e-88 329.7 294 58.5
FAN02G2038 Fragaria x ananassa HOM05D003255 ORTHO05D006458 3.7e-88 329.3 296 57.4
Actinidia30555 Actinidia chinensis HOM05D003255 ORTHO05D003705 4.8e-88 328.9 291 58.4
Lj1A1137T81 Lonicera japonica HOM05D003255 ORTHO05D003705 1.4e-87 327.4 298 58.1
CsaV3_3G043290 Cucumis sativus L. HOM05D003255 ORTHO05D003705 5.3e-87 325.5 290 56.2
Aqoxy2G00585 Aquilegia oxysepala HOM05D003255 ORTHO05D003705 9.1e-87 324.7 299 57.5
Hma1.2p1_0152F.1_g067770 Hydrangea macrophylla HOM05D003255 ORTHO05D003705 2.0e-86 323.6 292 58.2
MELO3C026889.2 Cucumis melo HOM05D003255 ORTHO05D003705 3.5e-86 322.8 289 56.1
TWI32G0868 Tripterygium wilfordii HOM05D003255 ORTHO05D003705 3.5e-86 322.8 298 57.0
Eucgr.K01497 Eucalyptus grandis HOM05D003255 ORTHO05D003705 5.9e-86 322.0 262 62.6
AUR62032686 Chenopodium quinoa HOM05D003255 ORTHO05D003705 2.9e-85 319.7 312 55.4
arahy.Tifrunner.gnm1.ann1.G0TJBI Arachis hypogaea HOM05D003255 ORTHO05D003705 3.8e-85 319.3 296 56.8
arahy.Tifrunner.gnm1.ann1.1MDK5L Arachis hypogaea HOM05D003255 ORTHO05D003705 6.5e-85 318.5 296 56.8
Rhsim09G0004800 Rhododendron simsii HOM05D003255 ORTHO05D003705 8.5e-85 318.2 308 53.6
Sed0025392 Sechium edule HOM05D003255 ORTHO05D003705 1.5e-84 317.4 293 56.7
vmacro12569 Vaccinium macrocarpon HOM05D003255 ORTHO05D003705 2.5e-84 316.6 316 53.5
EL10Ac3g06815 Beta vulgaris HOM05D003255 ORTHO05D003705 5.5e-84 315.5 318 54.1
Medtr7g085490 Medicago truncatula HOM05D003255 ORTHO05D003705 1.6e-83 313.9 294 57.5
Lj1g0023757 Lotus japonicus HOM05D003255 ORTHO05D003705 2.7e-83 313.2 296 57.4
Glyma.19G110700 Glycine max HOM05D003255 ORTHO05D003705 4.7e-83 312.4 294 58.5
Migut.J01892 Erythranthe guttata HOM05D003255 ORTHO05D003705 6.1e-83 312.0 289 57.8
AUR62032061 Chenopodium quinoa HOM05D003255 ORTHO05D003705 8.0e-83 311.6 315 54.3
Lsat_1_v5_gn_6_36921 Lactuca sativa HOM05D003255 ORTHO05D003705 8.0e-83 311.6 294 57.8
Oeu012405.1 Olea europaea HOM05D003255 ORTHO05D003705 8.0e-83 311.6 368 47.3
Ah.04g153230 Amaranthus hybridus HOM05D003255 ORTHO05D003705 3.0e-82 309.7 309 55.7
Lalb_Chr22g0359271 Lupinus albus HOM05D003255 ORTHO05D003705 4.0e-82 309.3 296 55.7
SalBow6G7123 Salvia bowleyana HOM05D003255 ORTHO05D003705 6.8e-82 308.5 294 56.8
Ca_08260_v3 Cicer arietinum L. HOM05D003255 ORTHO05D003705 1.5e-81 307.4 294 56.8
Glyma.16G041700 Glycine max HOM05D003255 ORTHO05D003705 2.0e-81 307.0 295 56.3
Nitab4.5_0000001g0080 Nicotiana tabacum HOM05D003255 ORTHO05D003705 2.6e-81 306.6 294 56.8
VMungo1383G0405 Vigna mungo HOM05D003255 ORTHO05D003705 5.7e-81 305.4 296 55.4
Nitab4.5_0002825g0020 Nicotiana tabacum HOM05D003255 ORTHO05D003705 7.5e-81 305.1 294 56.8
Peaxi162Scf00076g01039 Petunia axillaris HOM05D003255 ORTHO05D003705 9.8e-81 304.7 275 57.5
PSO339G4182 Papaver somniferum HOM05D003255 ORTHO05D003705 1.7e-80 303.9 299 54.8
HanXRQChr02g0054161 Helianthus annuus HOM05D003255 ORTHO05D003705 2.2e-80 303.5 289 57.1
PSO384G0936 Papaver somniferum HOM05D003255 ORTHO05D003705 2.2e-80 303.5 299 54.2
ClCG10G013330 Citrullus lanatus HOM05D003255 ORTHO05D003705 2.8e-80 303.1 279 57.0
CDE05G3425 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 4.8e-80 302.4 294 52.7
Phvul.001G110100 Phaseolus vulgaris HOM05D003255 ORTHO05D003705 4.8e-80 302.4 295 55.6
ECA233G1992 Erigeron canadensis HOM05D003255 ORTHO05D003705 6.3e-80 302.0 294 56.1
Psat3g089080 Pisum sativum HOM05D003255 ORTHO05D003705 6.3e-80 302.0 294 55.1
CAN.G317.15 Capsicum annuum HOM05D003255 ORTHO05D003705 1.8e-79 300.4 293 55.6
TAR623G0824 Trochodendron aralioides HOM05D003255 ORTHO05D003705 4.1e-79 299.3 286 54.5
unitig_746.g26891 Utricularia gibba HOM05D000423 ORTHO05D000284 3.5e-78 296.2 297 55.9
Cc06_g22890 Coffea canephora HOM05D003255 ORTHO05D003705 2.3e-77 293.5 307 50.8
PGSC0003DMG400008639 Solanum tuberosum HOM05D003255 ORTHO05D003705 2.9e-77 293.1 291 54.6
Solyc03g062720.3 Solanum lycopersicum HOM05D003255 ORTHO05D003705 3.8e-77 292.7 292 54.5
Sopen03g015030 Solanum pennellii HOM05D003255 ORTHO05D003705 6.6e-77 292.0 293 54.9
Nn7g35822 Nelumbo nucifera HOM05D003255 ORTHO05D003705 3.3e-76 289.7 255 58.0
CANSAT78G2239 Cannabis sativa HOM05D003255 ORTHO05D003705 9.5e-76 288.1 281 53.4
TPR.G5890 Trifolium pratense HOM05D003255 ORTHO05D003705 1.4e-74 284.3 293 53.9
Actinidia22086 Actinidia chinensis HOM05D003255 ORTHO05D003705 7.5e-73 278.5 230 60.0
Zm00001eb004410 Zea mays HOM05D003255 ORTHO05D003705 9.8e-73 278.1 257 53.3
Zm00001eb403240 Zea mays HOM05D003255 ORTHO05D003705 1.3e-72 277.7 264 51.5
Os03g0158300 Oryza sativa ssp. japonica HOM05D003255 ORTHO05D003705 2.8e-72 276.6 292 48.3
THA.LOC104814754 Tarenaya hassleriana HOM05D003255 ORTHO05D003705 1.6e-70 270.8 147 86.4
CSS0029701 Camellia sinensis var. sinensis HOM05D003255 ORTHO05D003705 1.6e-67 260.8 285 50.9
ATR0697G035 Amborella trichopoda HOM05D003255 ORTHO05D003705 1.0e-66 258.1 287 51.2
CDE01G0333 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 1.7e-64 250.8 235 51.9
Hund24838 Selenicereus undatus HOM05D003255 ORTHO05D003705 1.3e-48 198.0 243 49.8
CSS0030388 Camellia sinensis var. sinensis HOM05D003255 ORTHO05D003705 2.9e-48 196.8 210 53.3
DCAR_013690 Daucus carota HOM05D003255 ORTHO05D003705 4.9e-48 196.1 305 44.9
CDE02G4790 Ceratophyllum demersum HOM05D003255 ORTHO05D003705 3.3e-44 183.3 160 53.8
SEGI_06106 Sequoiadendron giganteum HOM05D003255 ORTHO05D003705 3.0e-29 133.7 249 35.3
Rhsim03G0001400 Rhododendron simsii HOM05D003255 ORTHO05D003705 3.5e-22 110.2 145 43.4
Rhsim03G0005300 Rhododendron simsii HOM05D003255 ORTHO05D003705 3.3e-20 103.6 188 38.3
Mapoly0135s0022 Marchantia polymorpha HOM05D003255 ORTHO05D003705 1.1e-18 98.6 299 28.1
AagrBONN_evm.TU.Sc2ySwM_368.2197 Anthoceros agrestis HOM05D003255 ORTHO05D003705 9.9e-17 92.0 282 29.4
Eucgr.K01496 Eucalyptus grandis HOM05D003255 ORTHO05D003705 8.4e-16 89.0 276 30.1
AagrBONN_evm.TU.Sc2ySwM_368.2200 Anthoceros agrestis HOM05D003255 ORTHO05D003705 7.4e-12 75.9 165 35.2
Aqoxy2G00586 Aquilegia oxysepala HOM05D003255 ORTHO05D003705 1.6e-11 74.7 261 28.0
PSO339G1718 Papaver somniferum HOM05D003255 ORTHO05D003705 1.6e-11 74.7 287 25.8
Potri.013G058601 Populus trichocarpa HOM05D003255 ORTHO05D003705 1.4e-10 71.6 69 49.3
Nn7g35823 Nelumbo nucifera HOM05D003255 ORTHO05D003705 2.4e-10 70.9 283 26.1
TPR.G39773 Trifolium pratense HOM05D003255 ORTHO05D003705 2.6e-09 67.4 54 59.3
Rhsim11G0022200 Rhododendron simsii HOM05D003255 ORTHO05D003705 8.4e-08 62.4 56 50.0


User provided reference genes

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