Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 2.1e-181 639.0 352 100.0
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 4.4e-155 551.6 356 88.5
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 1.1e-134 483.8 360 81.1
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 3.9e-119 432.2 360 75.6
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 7.6e-115 417.9 358 72.1
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 2.7e-112 409.5 362 69.9
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 2.2e-98 363.2 351 68.4
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 2.2e-98 363.2 352 67.9
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 8.7e-95 351.3 351 67.5
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 6.2e-93 345.1 350 65.1
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 9.0e-92 341.3 350 64.6
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 9.0e-92 341.3 350 64.6
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 6.3e-69 265.4 359 53.5
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 1.5e-67 260.8 378 51.1
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 4.4e-46 189.5 245 50.2
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 2.2e-45 187.2 350 38.9
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.8e-45 186.0 389 35.2
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.1e-44 184.9 395 37.7
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.1e-44 183.0 254 45.3
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 1.2e-43 181.4 388 40.2
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.2e-43 181.4 238 49.6
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.6e-43 181.0 253 47.4
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.0e-43 180.6 274 45.3
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.7e-43 180.3 274 45.3
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 3.5e-43 179.9 373 38.9
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 6.5e-42 175.6 335 40.0
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 8.5e-42 175.3 237 49.8
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 1.1e-41 174.9 350 37.4
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 2.5e-41 173.7 352 38.4
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 2.5e-41 173.7 281 43.1
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 4.2e-41 172.9 248 46.4
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 5.5e-41 172.6 263 43.3
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 3.6e-40 169.9 391 39.9
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 1.0e-39 168.3 397 37.0
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 3.0e-39 166.8 237 44.7
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 6.8e-39 165.6 383 37.6
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.2e-38 164.9 244 44.7
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.2e-37 160.6 274 43.1
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 8.3e-37 158.7 386 35.2
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 8.3e-37 158.7 415 35.7
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 3.1e-36 156.8 289 39.1
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 4.1e-36 156.4 257 42.8
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 9.2e-36 155.2 314 38.5
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 2.7e-35 153.7 388 37.1
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.5e-35 152.9 314 38.2
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 7.7e-35 152.1 388 36.6
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 7.7e-35 152.1 314 38.2
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 7.7e-35 152.1 314 38.2
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 7.7e-35 152.1 382 34.8
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 6.6e-34 149.1 257 40.5
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 6.6e-34 149.1 379 36.7
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 8.6e-34 148.7 335 38.5
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.9e-33 147.5 244 40.2
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 5.6e-33 146.0 313 38.0
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.6e-32 144.4 380 34.5
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 2.8e-32 143.7 244 39.8
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 3.6e-32 143.3 243 38.7
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 8.0e-32 142.1 322 36.3
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 8.0e-32 142.1 285 36.8
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.0e-31 141.7 364 34.9
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 3.0e-31 140.2 313 35.8
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.8e-31 139.0 241 39.4
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 1.5e-30 137.9 244 42.2
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.0e-30 137.5 242 39.3
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.0e-30 137.5 219 40.2
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.4e-30 136.7 241 39.0
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 5.7e-30 136.0 410 30.2
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 4.6e-27 126.3 281 41.3
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 4.6e-27 126.3 316 36.4
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.0e-26 125.2 345 33.9
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.3e-26 124.8 353 34.0
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.3e-26 124.8 296 36.5
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.7e-26 124.4 286 38.1
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 5.0e-26 122.9 246 41.1
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.5e-25 121.3 357 34.5
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 1.5e-25 121.3 237 35.9
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 5.6e-25 119.4 359 34.3
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 7.3e-25 119.0 375 33.9
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 2.1e-24 117.5 215 40.9
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.0e-23 115.2 232 38.4
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.8e-23 114.4 266 34.6
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 4.0e-23 113.2 375 29.9
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 2.4e-20 104.0 242 36.4
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 2.7e-19 100.5 172 39.5
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.0e-18 98.6 348 34.8
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 4.7e-16 89.7 353 28.9
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 3.4e-14 83.6 196 34.2
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 9.2e-12 75.5 209 34.0
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.1e-09 68.6 170 36.5
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.6e-08 64.7 107 40.2


User provided reference genes

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