Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G63320 Arabidopsis thaliana HOM05D000162 ORTHO05D003288 5.1e-49 198.4 190 100.0
A09p13890 Brassica napus HOM05D000162 ORTHO05D003288 6.9e-14 81.6 132 53.0
A09p13590 Brassica napus HOM05D000162 ORTHO05D003288 6.5e-12 75.1 183 57.4
C04p29110 Brassica napus HOM05D000162 ORTHO05D003288 4.2e-11 72.4 115 37.4
AT1G63080 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 6.1e-10 68.6 32 96.9
Thhalv10015983m.g Eutrema salsugineum HOM05D000162 ORTHO05D003288 2.3e-09 66.6 82 45.1
CARHR048090 Cardamine hirsuta HOM05D000162 ORTHO05D003288 8.8e-09 64.7 80 43.8
Carub.0002s0787 Capsella rubella HOM05D000162 ORTHO05D003288 2.6e-08 63.2 113 49.6
AL2G12810 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.3e-08 62.8 32 90.6
AL2G12830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.3e-08 62.8 32 90.6
AL2G12790 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 7.4e-08 61.6 80 43.8
CARHR048470 Cardamine hirsuta HOM05D000162 ORTHO05D003288 9.7e-08 61.2 37 75.7
BolC4t26917H Brassica oleracea HOM05D000162 ORTHO05D003288 1.3e-07 60.8 37 75.7
AT1G63070 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.7e-07 60.5 32 84.4
AT1G63130 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 2.8e-07 59.7 32 84.4
Thhalv10029183m.g Eutrema salsugineum HOM05D015660 ORTHO05D003288 3.7e-07 59.3 74 44.6
AL2G12510 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 4.8e-07 58.9 32 84.4
AL2G12820 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 4.8e-07 58.9 32 84.4
AT1G62670 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 4.8e-07 58.9 32 84.4
AT1G62910 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 4.8e-07 58.9 32 84.4
Carub.0002s0191 Capsella rubella HOM05D000162 ORTHO05D000090 4.8e-07 58.9 32 81.2
CARHR051000 Cardamine hirsuta HOM05D010315 ORTHO05D011376 4.8e-07 58.9 70 44.3
BolC9t54565H Brassica oleracea HOM05D000162 ORTHO05D003288 6.3e-07 58.5 80 41.2
CARHR048080 Cardamine hirsuta HOM05D000162 ORTHO05D003288 6.3e-07 58.5 32 81.2
AL2G13280 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 8.2e-07 58.2 32 81.2
AT1G62590 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 8.2e-07 58.2 32 81.2
AT1G63330 Arabidopsis thaliana HOM05D000162 ORTHO05D003288 8.2e-07 58.2 32 81.2
Carub.0002s0210 Capsella rubella HOM05D000162 ORTHO05D000090 8.2e-07 58.2 32 81.2
AL2G13150 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.1e-06 57.8 32 81.2
AL2G13170 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.1e-06 57.8 32 81.2
AL2G18840 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.1e-06 57.8 32 81.2
Carub.0002s0148 Capsella rubella HOM05D000162 ORTHO05D003288 1.1e-06 57.8 32 81.2
Carub.0002s0209 Capsella rubella HOM05D000162 ORTHO05D003288 1.1e-06 57.8 32 81.2
Thhalv10023354m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.1e-06 57.8 32 81.2
BcaC04g20649 Brassica carinata HOM05D000162 ORTHO05D003288 2.4e-06 56.6 119 41.2
Carub.0002s0190 Capsella rubella HOM05D000162 ORTHO05D003288 2.4e-06 56.6 32 81.2
AL2G12460 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.1e-06 56.2 30 86.7
Thhalv10023351m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 3.1e-06 56.2 32 78.1
CARHR047950 Cardamine hirsuta HOM05D015660 ORTHO05D003288 4.1e-06 55.8 32 75.0
CARHR048780 Cardamine hirsuta HOM05D000162 ORTHO05D003288 4.1e-06 55.8 32 78.1
CARHR048810 Cardamine hirsuta HOM05D000162 ORTHO05D000090 4.1e-06 55.8 32 78.1
Thhalv10023350m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.1e-06 55.8 32 75.0
Thhalv10023976m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.1e-06 55.8 32 78.1
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 5.3e-06 55.5 114 58.8
BraA09t41588Z Brassica rapa HOM05D003784 ORTHO05D004345 5.3e-06 55.5 117 40.2
Carub.0002s0192 Capsella rubella HOM05D000162 ORTHO05D003288 5.3e-06 55.5 32 78.1
CARHR051150 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.3e-06 55.5 32 75.0
Thhalv10023349m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 5.3e-06 55.5 32 75.0
Thhalv10023989m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 7.0e-06 55.1 32 75.0
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 9.1e-06 54.7 196 51.0
CARHR051050 Cardamine hirsuta HOM05D000162 ORTHO05D003288 9.1e-06 54.7 31 77.4
Thhalv10023345m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 9.1e-06 54.7 32 78.1


User provided reference genes

Program Settings