Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.5e-126 454.5 217 100.0
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-87 326.6 199 77.9
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.6e-83 312.0 178 84.3
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 7.3e-68 261.2 173 69.9
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 5.1e-61 238.4 194 59.8
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.6e-61 238.0 196 59.7
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.7e-59 231.9 192 57.3
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 6.9e-58 228.0 201 57.7
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 3.8e-56 222.2 192 55.7
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.0e-50 202.2 177 56.5
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-47 194.1 178 53.4
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-47 193.7 188 52.7
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 2.4e-47 193.0 188 52.1
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.4e-47 193.0 179 54.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 5.4e-47 191.8 209 48.3
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-45 187.2 210 49.0
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-45 187.2 210 49.0
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-45 185.7 190 50.0
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.7e-45 184.5 176 55.7
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-44 184.1 166 50.6
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 4.8e-43 178.7 209 48.8
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-42 176.0 174 49.4
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 4.0e-42 175.6 240 42.1
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-41 172.9 168 50.6
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.4e-41 172.6 170 51.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.6e-41 171.4 169 49.1
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 4.6e-38 162.2 189 44.4
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 4.6e-38 162.2 189 44.4
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 5.1e-37 158.7 168 47.0
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-33 146.4 201 41.8
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.4e-31 140.6 185 42.2
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.9e-31 140.2 181 42.0
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.9e-31 140.2 174 40.2
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 9.3e-31 137.9 154 47.4
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-29 133.7 178 38.8
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 3.7e-27 125.9 117 53.8
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.8e-26 123.6 121 51.2
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 4.1e-26 122.5 149 39.6
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-24 117.9 173 42.8
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-24 117.5 186 37.6
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-24 116.7 179 38.5
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 8.5e-24 114.8 185 37.8
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 8.5e-24 114.8 116 52.6
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-23 114.4 179 37.4
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 5.5e-23 112.1 168 39.9
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.1e-22 108.6 167 38.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 6.1e-22 108.6 143 41.3
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 6.1e-22 108.6 145 42.1
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 6.1e-22 108.6 145 42.1
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.3e-21 107.5 148 41.9
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-21 105.9 148 39.2
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.7e-21 105.1 175 36.0
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 9.7e-20 101.3 122 44.3
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-19 100.5 169 36.7
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.7e-19 99.4 135 40.7
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 4.8e-19 99.0 136 41.2
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.4e-18 97.4 157 38.2
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.4e-18 96.7 143 37.8
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.1e-18 95.9 109 45.0
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 4.1e-18 95.9 142 40.1
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 6.9e-18 95.1 157 36.9
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 6.9e-18 95.1 143 37.1
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-17 94.0 81 54.3
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 4.5e-17 92.4 126 38.1
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 7.7e-17 91.7 147 35.4
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-16 91.3 137 38.7
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-16 90.9 155 36.8
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-16 89.7 157 35.7
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.9e-16 89.7 183 35.5
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-16 89.4 145 36.6
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-16 89.4 145 36.6
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 8.5e-16 88.2 157 35.7
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 8.5e-16 88.2 157 35.7
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-15 87.8 126 38.1
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.1e-15 87.8 167 31.1
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-15 87.8 132 36.4
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-15 87.4 153 35.3
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.9e-15 87.0 134 35.8
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 4.2e-15 85.9 147 35.4
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 5.5e-15 85.5 133 39.1
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.5e-15 85.5 133 39.1
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 7.2e-15 85.1 146 34.2
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 7.2e-15 85.1 153 35.3
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-14 84.3 148 34.5
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-14 82.8 139 38.1
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 3.6e-14 82.8 139 38.1
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 6.1e-14 82.0 111 39.6
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 6.1e-14 82.0 111 39.6
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 1.0e-13 81.3 134 35.8
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.4e-13 80.9 148 33.8
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 3.0e-13 79.7 122 39.3
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 5.1e-13 79.0 126 40.5
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 6.7e-13 78.6 145 35.2
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.8e-13 78.2 183 33.3
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 2.6e-12 76.6 139 36.0
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 4.4e-12 75.9 139 36.0
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 4.4e-12 75.9 139 36.0
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 4.4e-12 75.9 139 36.0
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 5.7e-12 75.5 147 34.7
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-11 74.3 147 34.7
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-11 73.9 168 31.5
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.8e-11 73.2 131 32.8
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 2.8e-11 73.2 137 35.0
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 2.8e-11 73.2 137 35.0
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 6.3e-11 72.0 134 35.8
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 6.3e-11 72.0 139 34.5
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 6.3e-11 72.0 141 34.0
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 1.1e-10 71.2 125 36.0
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-10 71.2 104 35.6
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.1e-10 71.2 132 34.1
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.8e-10 70.5 110 31.8
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-10 70.1 144 31.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-10 69.7 175 30.3
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 3.1e-10 69.7 120 36.7
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 5.3e-10 68.9 131 31.3
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 9.1e-10 68.2 139 33.8
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 9.1e-10 68.2 139 33.8
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.0e-09 67.0 140 34.3
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 4.5e-09 65.9 127 33.9
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 4.5e-09 65.9 112 34.8
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 5.9e-09 65.5 120 35.8
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.0e-08 64.7 110 35.5
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.0e-08 64.7 126 32.5
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.7e-08 63.9 115 33.9
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.7e-08 63.9 171 31.6
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 1.7e-08 63.9 135 33.3
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 2.2e-08 63.5 126 32.5
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 2.2e-08 63.5 126 32.5
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 2.2e-08 63.5 127 33.1
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-07 61.2 145 34.5
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 1.4e-07 60.8 106 34.9
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 1.9e-07 60.5 166 27.1
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.5e-07 60.1 126 33.3
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 3.2e-07 59.7 111 34.2
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.5e-07 58.9 45 57.8
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 9.4e-07 58.2 71 45.1
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.2e-06 57.8 72 44.4
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 2.1e-06 57.0 123 33.3
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 2.1e-06 57.0 72 44.4
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.7e-06 56.6 115 33.9
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.6e-06 56.2 143 30.1
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.7e-06 55.8 138 33.3


User provided reference genes

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