Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.1e-122 443.4 238 100.0
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 6.5e-118 427.6 238 96.6
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 5.0e-110 401.4 238 88.2
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 8.5e-110 400.6 238 89.1
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 8.5e-110 400.6 238 89.1
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 8.5e-110 400.6 238 89.1
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.4e-109 399.8 238 89.1
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.2e-109 398.7 238 88.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.2e-109 398.3 240 87.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 9.4e-109 397.1 238 88.7
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.1e-108 396.0 238 88.7
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 6.1e-108 394.4 249 87.1
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.8e-107 392.9 239 87.9
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 1.1e-96 357.1 238 79.8
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 7.2e-85 317.8 242 70.7
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 3.0e-83 312.4 242 69.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 6.7e-83 311.2 243 69.1
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.2e-82 310.5 240 67.9
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.3e-81 307.0 240 68.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 2.2e-81 306.2 242 67.4
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 6.3e-81 304.7 245 66.1
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 6.3e-81 304.7 238 66.4
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 8.2e-81 304.3 240 67.9
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 8.2e-81 304.3 243 68.3
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.8e-80 303.1 239 66.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 3.1e-80 302.4 241 67.2
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.3e-80 301.6 239 67.8
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.2e-79 300.4 243 67.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.6e-79 300.1 243 64.6
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.7e-79 299.3 241 67.6
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.7e-79 299.3 241 66.0
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 3.5e-79 298.9 243 65.8
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 7.7e-79 297.7 228 66.2
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.7e-78 296.6 241 64.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.7e-78 296.6 244 65.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.7e-78 296.6 240 65.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 2.2e-78 296.2 244 65.6
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.2e-78 296.2 241 65.6
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 2.2e-78 296.2 241 66.8
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.9e-78 295.8 236 64.4
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.8e-78 295.4 243 65.4
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 5.0e-78 295.0 243 64.6
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 6.5e-78 294.7 239 64.4
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.9e-77 293.1 245 64.1
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 66.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 66.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 239 64.4
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 7.2e-77 291.2 240 64.2
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 7.2e-77 291.2 239 64.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 7.2e-77 291.2 241 65.1
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 9.4e-77 290.8 241 64.7
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.6e-76 290.0 245 63.7
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.6e-76 290.0 242 65.3
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 8.0e-76 287.7 243 64.6
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 8.0e-76 287.7 241 62.2
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.4e-75 287.0 241 64.3
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-75 286.2 241 65.6
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.3e-75 286.2 239 63.2
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.0e-75 285.8 243 61.3
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.8e-75 284.6 249 62.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 8.8e-75 284.3 240 62.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.0e-74 283.1 206 70.9
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.4e-74 282.3 241 63.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.4e-74 282.3 252 61.5
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 7.5e-74 281.2 229 63.3
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 9.8e-74 280.8 208 67.3
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.7e-73 280.0 227 63.9
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 4.8e-73 278.5 208 66.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 4.8e-73 278.5 239 61.5
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 8.3e-73 277.7 208 66.3
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.4e-72 276.2 201 71.1
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 4.1e-72 275.4 242 60.7
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 7.0e-72 274.6 204 69.6
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.2e-71 273.9 219 68.0
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 2.0e-71 273.1 249 62.2
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 4.5e-71 271.9 241 59.8
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.0e-70 270.8 217 63.6
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.0e-70 270.8 208 65.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.3e-70 270.4 231 59.3
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.3e-70 269.6 214 65.4
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 2.3e-70 269.6 231 59.3
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 2.3e-70 269.6 217 63.1
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.8e-70 268.9 206 66.0
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.5e-69 266.9 240 60.4
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 4.2e-69 265.4 226 62.4
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.4e-67 260.4 219 63.5
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.3e-67 259.6 230 60.0
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.6e-63 246.9 238 57.6
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.5e-63 245.4 233 57.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 6.6e-62 241.5 190 71.1
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.1e-61 240.7 213 60.6
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.5e-61 240.4 243 53.9
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.5e-61 239.6 233 57.1
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 5.4e-56 221.9 247 54.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.5e-53 213.0 207 52.2
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.3e-53 212.6 171 66.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.1e-52 209.9 249 47.8
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 3.1e-51 206.1 226 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.2e-49 199.9 206 51.0
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.6e-44 182.6 227 44.5
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 6.4e-41 171.8 157 61.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 6.2e-36 155.2 229 43.2
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.2e-34 151.0 163 53.4
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 3.4e-34 149.4 118 69.5
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.4e-32 143.3 116 67.2
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.1e-30 135.6 99 69.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.9e-25 119.0 241 36.5
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.5e-18 95.9 79 59.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 5.4e-16 89.0 190 32.6
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.4e-11 73.6 156 30.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 5.3e-11 72.4 59 59.3
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 5.5e-08 62.4 52 59.6
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.0e-06 58.2 53 62.3


User provided reference genes

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