Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G62225 Arabidopsis thaliana HOM05D008464 ORTHO05D011143 2.0e-58 229.2 144 100.0
AL2G13690 Arabidopsis lyrata HOM05D008464 ORTHO05D011143 6.6e-41 171.0 144 71.5
Carub.0002s0278 Capsella rubella HOM05D008464 ORTHO05D011143 1.2e-18 97.1 147 57.1
CARHR049900 Cardamine hirsuta HOM05D008464 ORTHO05D011143 2.4e-14 82.8 142 45.8
Thhalv10023864m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 3.4e-13 79.0 111 50.5
Carub.0002s0283 Capsella rubella HOM05D008464 ORTHO05D014850 5.8e-13 78.2 105 49.5
Sp2g02460 Schrenkiella parvula HOM05D008464 ORTHO05D011143 2.9e-12 75.9 119 47.1
Carub.0002s0282 Capsella rubella HOM05D008464 ORTHO05D014850 4.2e-11 72.0 143 46.9
A09p16500 Brassica napus HOM05D008464 ORTHO05D011143 1.6e-10 70.1 143 40.6
BraA09t37288Z Brassica rapa HOM05D008464 ORTHO05D011143 1.6e-10 70.1 143 40.6
AT1G62220 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 1.3e-09 67.0 119 45.4
Carub.0002s0281 Capsella rubella HOM05D008464 ORTHO05D014850 1.8e-09 66.6 96 50.0
AL3G48150 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.3e-09 66.2 115 47.8
AT1G62060 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 2.3e-09 66.2 113 45.1
BcaC08g45479 Brassica carinata HOM05D008464 ORTHO05D011143 2.3e-09 66.2 142 44.4
BolC6t38268H Brassica oleracea HOM05D008464 ORTHO05D011143 2.3e-09 66.2 142 44.4
Sp2g02420 Schrenkiella parvula HOM05D008464 ORTHO05D011143 3.0e-09 65.9 117 47.9
AT1G62000 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 8.7e-09 64.3 117 43.6
A09p16470 Brassica napus HOM05D008464 ORTHO05D011143 3.3e-08 62.4 145 37.2
Carub.0002s0304 Capsella rubella HOM05D008464 ORTHO05D014850 4.3e-08 62.0 105 45.7
C06p31300 Brassica napus HOM05D008464 ORTHO05D011143 1.6e-07 60.1 119 41.2
BraA09t37284Z Brassica rapa HOM05D008464 ORTHO05D011143 1.6e-07 60.1 120 42.5
BcaC04g22371 Brassica carinata HOM05D008464 ORTHO05D011143 4.8e-07 58.5 106 40.6
BraA07t30447Z Brassica rapa HOM05D008464 ORTHO05D011143 8.1e-07 57.8 123 39.8
C09p20030 Brassica napus HOM05D008464 ORTHO05D011143 1.4e-06 57.0 145 35.9
BolC9t54911H Brassica oleracea HOM05D008464 ORTHO05D011143 1.4e-06 57.0 145 35.9
Sp2g02440 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.8e-06 56.6 107 43.9
Thhalv10024101m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 3.1e-06 55.8 107 42.1
A09p16490 Brassica napus HOM05D008464 ORTHO05D011143 4.0e-06 55.5 118 39.0
AL2G13700 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 5.3e-06 55.1 105 44.8
Carub.0002s0279 Capsella rubella HOM05D008464 ORTHO05D014850 5.3e-06 55.1 83 47.0
AL2G14040 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 6.9e-06 54.7 60 58.3
A07p28020 Brassica napus HOM05D008464 ORTHO05D011143 6.9e-06 54.7 119 40.3
BraA09t37286Z Brassica rapa HOM05D008464 ORTHO05D011143 6.9e-06 54.7 120 39.2


User provided reference genes

Program Settings