Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G62060 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 6.4e-55 217.6 151 100.0
AT1G62220 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 7.6e-40 167.5 142 71.8
AT1G62000 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 6.1e-37 157.9 151 81.5
AL3G48150 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.8e-34 149.1 147 63.3
AT1G62080 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 1.7e-31 139.8 151 74.2
AL2G14040 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 7.4e-27 124.4 147 67.3
AL2G14030 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 9.7e-27 124.0 111 69.4
AL2G13700 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 7.9e-21 104.4 103 67.0
Carub.0002s0281 Capsella rubella HOM05D008464 ORTHO05D014850 6.7e-20 101.3 94 67.0
Carub.0002s0282 Capsella rubella HOM05D008464 ORTHO05D014850 1.3e-15 87.0 142 51.4
Carub.0002s0279 Capsella rubella HOM05D008464 ORTHO05D014850 3.8e-15 85.5 78 67.9
Carub.0002s0283 Capsella rubella HOM05D008464 ORTHO05D014850 1.5e-14 83.6 107 55.1
Carub.0002s0304 Capsella rubella HOM05D008464 ORTHO05D014850 6.1e-13 78.2 109 54.1
Sp2g02460 Schrenkiella parvula HOM05D008464 ORTHO05D011143 6.7e-12 74.7 113 51.3
A09p16470 Brassica napus HOM05D008464 ORTHO05D011143 1.3e-10 70.5 112 50.9
BraA09t37284Z Brassica rapa HOM05D008464 ORTHO05D011143 2.2e-10 69.7 112 50.9
Thhalv10023864m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 2.2e-10 69.7 107 47.7
C09p20030 Brassica napus HOM05D008464 ORTHO05D011143 2.8e-10 69.3 112 49.1
BolC9t54911H Brassica oleracea HOM05D008464 ORTHO05D011143 2.8e-10 69.3 112 49.1
A09p16500 Brassica napus HOM05D008464 ORTHO05D011143 1.4e-09 67.0 108 46.3
BraA09t37288Z Brassica rapa HOM05D008464 ORTHO05D011143 1.4e-09 67.0 108 46.3
CARHR049900 Cardamine hirsuta HOM05D008464 ORTHO05D011143 3.1e-09 65.9 105 46.7
AT1G62225 Arabidopsis thaliana HOM05D008464 ORTHO05D011143 7.7e-08 61.2 113 45.1
BcaC04g22371 Brassica carinata HOM05D008464 ORTHO05D011143 7.7e-08 61.2 98 46.9
Carub.0002s0278 Capsella rubella HOM05D008464 ORTHO05D011143 1.0e-07 60.8 101 43.6
BcaC04g22373 Brassica carinata HOM05D008464 ORTHO05D011143 1.1e-06 57.4 108 46.3
BcaC04g22374 Brassica carinata HOM05D008464 ORTHO05D011143 1.1e-06 57.4 108 46.3
BcaC08g45479 Brassica carinata HOM05D008464 ORTHO05D011143 1.5e-06 57.0 105 41.0
BolC6t38268H Brassica oleracea HOM05D008464 ORTHO05D011143 1.5e-06 57.0 105 41.0
BraA09t37286Z Brassica rapa HOM05D008464 ORTHO05D011143 1.5e-06 57.0 113 45.1
Sp2g02420 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.5e-06 57.0 106 43.4
AL2G13690 Arabidopsis lyrata HOM05D008464 ORTHO05D011143 1.9e-06 56.6 113 42.5
Thhalv10024101m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 2.5e-06 56.2 74 48.6
A09p16490 Brassica napus HOM05D008464 ORTHO05D011143 4.2e-06 55.5 113 44.2
Carub.0002s0280 Capsella rubella HOM05D008464 ORTHO05D114275 4.2e-06 55.5 80 50.0
BraA07t30447Z Brassica rapa HOM05D008464 ORTHO05D011143 5.5e-06 55.1 105 41.9


User provided reference genes

Program Settings