Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G60987 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 2.3e-53 211.8 98 100.0
AL2G15490 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 9.4e-39 163.3 98 76.5
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 5.7e-36 154.1 98 72.4
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 1.1e-34 149.8 98 69.4
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 7.9e-30 133.7 98 65.3
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.8e-27 124.4 98 59.2
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.1e-26 123.2 98 59.2
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 5.3e-26 120.9 96 58.3
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 1.3e-24 116.3 96 56.2
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 1.1e-23 113.2 98 54.1
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 3.6e-22 108.2 96 52.1
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 4.7e-22 107.8 96 51.0
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 4.7e-22 107.8 96 51.0
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 8.0e-22 107.1 96 51.0
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 8.0e-22 107.1 96 51.0
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 8.0e-22 107.1 99 52.5
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 1.0e-21 106.7 96 51.0
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 1.0e-21 106.7 96 50.0
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 1.0e-21 106.7 96 50.0
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 1.1e-20 103.2 96 50.0
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 2.6e-20 102.1 96 51.0
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 3.3e-20 101.7 96 50.0
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 3.3e-20 101.7 134 44.0
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 6.8e-13 77.4 97 42.3
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 6.8e-13 77.4 97 42.3
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 2.0e-12 75.9 97 41.2
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 2.8e-11 72.0 97 39.2
Thhalv10023863m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 2.8e-11 72.0 97 41.2
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 6.3e-11 70.9 97 37.1
BcaC02g10447 Brassica carinata HOM05D009053 ORTHO05D014846 2.4e-10 68.9 97 41.2
C04p28810 Brassica napus HOM05D009053 ORTHO05D014846 2.4e-10 68.9 97 41.2
BolC4t24415H Brassica oleracea HOM05D009053 ORTHO05D014846 2.4e-10 68.9 97 41.2
Sp2g03580 Schrenkiella parvula HOM05D009053 ORTHO05D014846 2.4e-10 68.9 100 38.0
A03p68010 Brassica napus HOM05D009053 ORTHO05D014846 9.1e-10 67.0 93 40.9
BraA01t02672Z Brassica rapa HOM05D009053 ORTHO05D014846 9.1e-10 67.0 93 40.9
Thhalv10024151m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 2.0e-09 65.9 100 38.0
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 5.5e-07 57.8 92 37.0
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 8.0e-06 53.9 91 34.1


User provided reference genes

Program Settings