Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G59460 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.3e-108 395.6 200 100.0
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 2.7e-93 345.5 201 88.1
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 9.0e-89 330.5 200 84.5
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 1.3e-87 326.6 201 84.6
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 8.5e-87 323.9 200 84.0
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 8.5e-87 323.9 200 83.5
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 1.9e-86 322.8 200 83.5
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 1.9e-86 322.8 200 83.5
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 1.9e-86 322.8 200 83.5
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 2.5e-86 322.4 200 83.5
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 2.5e-86 322.4 200 83.5
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 5.5e-86 321.2 200 84.0
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 9.3e-86 320.5 200 83.0
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 9.3e-86 320.5 200 83.0
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.3e-84 316.6 200 82.5
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 5.7e-83 311.2 199 80.4
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 4.4e-75 285.0 200 71.5
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 9.4e-62 240.7 200 62.0
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 5.3e-57 224.9 208 59.1
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 5.3e-57 224.9 208 59.1
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.2e-56 223.8 207 59.4
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 3.5e-56 222.2 208 58.7
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 1.0e-55 220.7 207 58.9
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 6.5e-55 218.0 206 57.8
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 1.1e-54 217.2 205 58.5
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 1.1e-54 217.2 203 56.7
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 3.2e-54 215.7 208 56.7
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 4.2e-54 215.3 207 57.5
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 4.2e-54 215.3 208 58.2
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 2.7e-53 212.6 207 57.0
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 4.7e-53 211.8 207 56.5
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.7e-53 211.8 207 56.5
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 8.0e-53 211.1 207 56.0
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 1.0e-52 210.7 208 56.7
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 1.4e-52 210.3 207 56.0
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 1.8e-52 209.9 208 56.2
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 2.3e-52 209.5 200 54.5
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 5.2e-52 208.4 200 54.5
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 6.8e-52 208.0 208 56.2
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 8.8e-52 207.6 208 55.3
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 5.7e-51 204.9 207 55.1
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 7.5e-51 204.5 208 55.3
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 9.8e-51 204.1 207 53.1
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 2.2e-50 203.0 206 55.8
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 4.8e-50 201.8 207 54.6
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 8.3e-50 201.1 207 54.1
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 1.4e-49 200.3 208 51.9
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 1.4e-49 200.3 208 51.9
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 2.4e-49 199.5 204 50.5
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 3.1e-49 199.1 207 53.1
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 4.1e-49 198.7 204 56.4
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 4.1e-49 198.7 208 54.3
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 5.4e-49 198.4 208 52.9
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 7.0e-49 198.0 208 52.9
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 2.0e-48 196.4 204 55.4
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 2.7e-48 196.1 208 52.9
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 4.5e-48 195.3 207 53.1
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 4.5e-48 195.3 207 53.6
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 5.9e-48 194.9 207 53.1
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 7.7e-48 194.5 206 54.4
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 1.0e-47 194.1 208 52.9
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 1.3e-47 193.7 204 53.4
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.7e-47 193.4 206 50.5
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 2.3e-47 193.0 219 49.8
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 3.8e-47 192.2 207 53.1
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 5.0e-47 191.8 208 51.4
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 5.0e-47 191.8 209 52.2
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 5.0e-47 191.8 208 51.4
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 6.5e-47 191.4 204 52.9
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 1.1e-46 190.7 211 50.7
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 1.1e-46 190.7 208 51.4
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 1.5e-46 190.3 200 50.5
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 1.9e-46 189.9 207 52.2
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 1.9e-46 189.9 208 51.4
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 2.5e-46 189.5 208 51.0
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 5.5e-46 188.3 208 51.0
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 5.5e-46 188.3 208 52.9
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.2e-45 187.2 206 49.5
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.2e-45 187.2 210 50.5
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 1.6e-45 186.8 207 51.7
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.6e-45 186.8 209 51.7
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 3.6e-45 185.7 207 51.2
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 6.1e-45 184.9 208 51.4
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.0e-44 184.1 208 51.4
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 1.0e-44 184.1 208 50.5
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 1.4e-44 183.7 204 52.5
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 1.8e-44 183.3 209 51.2
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.8e-44 183.3 209 51.2
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.2e-44 181.8 209 50.7
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 5.2e-44 181.8 205 49.8
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 5.2e-44 181.8 218 47.2
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 6.8e-44 181.4 204 49.5
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 1.2e-43 180.6 203 50.7
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 1.5e-43 180.3 209 50.2
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.6e-43 179.5 209 50.2
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 5.7e-43 178.3 207 50.7
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 9.8e-43 177.6 208 50.0
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 1.3e-42 177.2 207 47.3
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.7e-42 176.8 206 51.5
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 1.7e-42 176.8 251 44.2
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.2e-42 176.4 204 51.0
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 4.1e-41 172.2 213 49.8
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 7.0e-41 171.4 209 47.4
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 9.2e-41 171.0 202 51.0
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.0e-39 167.5 206 50.5
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 3.8e-39 165.6 209 49.3
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 3.3e-38 162.5 206 45.1
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 1.6e-37 160.2 212 45.8
Zm00001eb247960 Zea mays HOM05D002969 ORTHO05D003308 1.4e-36 157.1 206 43.7
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 3.0e-36 156.0 214 43.9
HPP92_011313 Vanilla planifolia HOM05D002969 ORTHO05D003308 3.0e-36 156.0 208 40.9
Zm00001eb254660 Zea mays HOM05D002969 ORTHO05D003308 1.2e-35 154.1 206 43.2
Zm00001eb254680 Zea mays HOM05D002969 ORTHO05D003308 1.2e-35 154.1 206 43.2
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 1.2e-35 154.1 206 43.2
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 7.5e-35 151.4 214 45.3
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 2.7e-32 142.9 207 40.1
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 4.6e-32 142.1 211 43.6
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 7.8e-32 141.4 211 43.1
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 4.3e-30 135.6 211 42.2
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 2.1e-29 133.3 206 42.2
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 3.1e-28 129.4 209 40.2
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 2.2e-26 123.2 212 36.8
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.4e-25 120.6 217 35.9
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 1.7e-23 113.6 222 34.7
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 3.9e-23 112.5 113 55.8
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 8.9e-20 101.3 207 32.9
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.4e-17 94.0 188 37.8
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.3e-15 86.7 103 48.5
Glyma.12G000400 Glycine max HOM05D002969 ORTHO05D003308 4.7e-13 79.0 113 44.2
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 5.4e-09 65.5 82 43.9
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 2.1e-08 63.5 110 41.8


User provided reference genes

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