Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 7.0e-184 647.1 320 100.0
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 3.5e-183 644.8 320 99.7
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.4e-179 632.9 320 97.5
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.8e-177 625.2 320 95.9
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 8.3e-177 623.6 320 95.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.8e-176 622.5 320 95.6
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 3.5e-175 618.2 321 95.6
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 4.5e-175 617.8 321 95.3
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 4.5e-175 617.8 321 95.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 6.8e-171 604.0 347 88.5
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 8.6e-166 587.0 323 89.5
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.4e-163 579.7 324 88.6
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.0e-163 578.6 322 89.4
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 9.2e-152 540.4 286 94.4
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 8.1e-148 527.3 310 82.3
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.2e-147 524.6 310 81.6
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 2.2e-145 519.2 311 80.7
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.2e-145 519.2 311 80.7
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.7e-145 518.5 310 80.6
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.4e-144 515.8 310 79.7
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 3.2e-144 515.4 311 80.4
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.2e-143 513.5 310 80.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.6e-143 511.5 310 79.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.0e-142 510.4 311 79.7
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 3.0e-142 508.8 309 80.6
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.0e-142 508.8 309 80.6
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 8.6e-142 507.3 310 79.7
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.2e-140 503.4 309 79.9
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.2e-140 503.4 310 79.0
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 2.8e-140 502.3 310 79.0
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 8.1e-140 500.7 312 79.5
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 2.3e-139 499.2 310 78.1
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 3.1e-139 498.8 311 78.8
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.2e-138 496.9 312 77.9
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.4e-138 495.0 318 77.0
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.3e-137 493.4 312 77.6
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.9e-137 492.3 311 77.2
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.1e-136 490.3 320 76.2
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.9e-136 489.6 312 76.6
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.4e-136 489.2 311 77.2
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.7e-135 485.7 310 75.5
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.3e-134 482.6 311 75.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.9e-134 481.9 311 75.6
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 5.1e-134 481.5 311 75.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 6.6e-134 481.1 310 74.8
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 9.6e-133 477.2 311 74.3
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.2e-132 476.9 327 71.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.6e-132 476.5 312 76.0
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 2.8e-132 475.7 311 74.6
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.8e-131 473.0 319 72.1
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.8e-131 473.0 314 71.7
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.9e-131 471.1 310 73.5
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.2e-130 470.3 318 71.4
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.0e-130 469.5 319 71.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.0e-130 469.5 314 70.7
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.4e-130 468.4 322 72.0
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 4.9e-129 464.9 311 73.3
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.4e-128 463.4 309 73.5
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 4.2e-128 461.8 310 71.6
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 7.1e-128 461.1 320 69.7
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.1e-127 459.5 270 82.6
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.7e-127 459.1 341 67.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.9e-126 455.3 312 71.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 6.6e-126 454.5 289 76.1
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.1e-125 453.8 336 68.2
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 9.0e-123 444.1 318 68.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.0e-122 443.0 309 69.9
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.6e-122 442.6 318 67.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 3.4e-122 442.2 318 66.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 4.5e-122 441.8 318 67.0
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.1e-120 437.2 318 66.7
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.9e-120 436.4 311 67.2
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.9e-120 436.4 321 68.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.6e-119 431.8 314 65.0
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 7.9e-119 431.0 318 64.8
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 6.7e-118 427.9 312 66.0
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.1e-117 427.2 316 63.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 9.6e-117 424.1 339 61.9
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.8e-116 422.5 290 70.7
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.8e-116 421.8 318 64.8
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.8e-115 419.9 311 65.6
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 2.4e-115 419.5 274 76.6
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 4.6e-111 405.2 309 63.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 5.5e-104 381.7 251 74.5
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.6e-103 380.2 315 61.3
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 7.9e-103 377.9 234 80.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.3e-100 370.5 234 76.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 8.2e-100 367.9 315 61.0
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 5.3e-99 365.2 309 55.3
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.2e-96 355.9 309 59.2
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 3.6e-95 352.4 296 57.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.2e-90 337.4 321 56.4
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 9.4e-88 327.8 309 50.8
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.7e-87 326.2 308 50.3
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.0e-86 322.8 313 48.9
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.0e-86 322.8 313 48.9
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-83 312.4 308 48.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 5.3e-83 312.0 220 68.2
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.7e-82 308.1 308 47.4
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.4e-80 303.9 306 48.4
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.6e-79 300.4 257 56.8
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.7e-79 298.9 308 47.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.7e-77 292.0 308 46.1
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.4e-77 291.6 307 47.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.6e-74 283.9 318 45.6
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 4.2e-72 275.8 311 49.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.8e-70 270.4 311 46.6
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 8.3e-60 235.0 213 52.6
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 5.4e-43 179.1 270 38.9
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 8.1e-31 138.7 114 60.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.7e-28 131.0 106 59.4


User provided reference genes

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