Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 4.9e-38 160.6 79 100.0
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 1.7e-27 125.6 77 84.4
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 2.5e-26 121.7 81 77.8
A05p19260 Brassica napus HOM05D012542 ORTHO05D010186 4.2e-21 104.4 80 66.2
BraA05t20831Z Brassica rapa HOM05D012542 ORTHO05D010186 4.2e-21 104.4 80 66.2
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 5.4e-21 104.0 82 69.5
BcaC08g43950 Brassica carinata HOM05D012542 ORTHO05D010186 1.3e-19 99.4 80 66.2
BcaC08g43951 Brassica carinata HOM05D012542 ORTHO05D010186 1.3e-19 99.4 80 66.2
C06p13490 Brassica napus HOM05D012542 ORTHO05D010186 1.3e-19 99.4 80 66.2
BolC6t36512H Brassica oleracea HOM05D012542 ORTHO05D010186 1.3e-19 99.4 80 66.2
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 6.2e-17 90.5 78 62.8
Thhalv10011907m.g Eutrema salsugineum HOM05D012542 ORTHO05D010186 1.5e-15 85.9 78 62.8
CARHR042070 Cardamine hirsuta HOM05D012542 ORTHO05D010186 2.9e-14 81.6 77 59.7
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 1.3e-09 66.2 77 48.1
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 2.1e-09 65.5 77 46.8
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 4.8e-09 64.3 71 46.5
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 6.2e-09 63.9 64 51.6
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 8.1e-09 63.5 67 52.2
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 1.4e-08 62.8 67 49.3
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 5.3e-08 60.8 64 46.9
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 9.0e-08 60.1 64 45.3
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 9.0e-08 60.1 76 48.7
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 9.0e-08 60.1 72 47.2
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.2e-07 59.7 70 47.1
BcaB02g11037 Brassica carinata HOM05D012542 ORTHO05D010186 1.5e-07 59.3 79 50.6
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 3.4e-07 58.2 67 47.8
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 3.4e-07 58.2 67 44.8
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.8e-07 57.4 71 43.7
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 5.8e-07 57.4 67 46.3
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 7.6e-07 57.0 56 48.2
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 9.9e-07 56.6 62 45.2
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.7e-06 55.8 69 47.8
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.7e-06 55.8 69 46.4
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 3.8e-06 54.7 73 46.6
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 3.8e-06 54.7 62 50.0
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 8.4e-06 53.5 51 45.1


User provided reference genes

Program Settings