Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G51913 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 4.8e-38 160.6 78 100.0
AL1G59950 Arabidopsis lyrata HOM05D009023 ORTHO05D011144 1.2e-31 139.4 74 91.9
CARHR042050 Cardamine hirsuta HOM05D009023 ORTHO05D011144 2.2e-30 135.2 74 87.8
Carub.0001s4083 Capsella rubella HOM05D009023 ORTHO05D011144 1.0e-27 126.3 76 85.5
BcaC08g43952 Brassica carinata HOM05D009023 ORTHO05D011144 3.0e-24 114.8 81 72.8
C06p13510 Brassica napus HOM05D009023 ORTHO05D011144 3.0e-24 114.8 81 72.8
BolC6t36514H Brassica oleracea HOM05D009023 ORTHO05D011144 3.0e-24 114.8 81 72.8
A05p19250 Brassica napus HOM05D009023 ORTHO05D011144 4.9e-22 107.5 82 69.5
CARHR042060 Cardamine hirsuta HOM05D009023 ORTHO05D011144 9.1e-21 103.2 74 68.9
Thhalv10012030m.g Eutrema salsugineum HOM05D009023 ORTHO05D011144 1.7e-19 99.0 70 67.1
Sp1g38570 Schrenkiella parvula HOM05D009023 ORTHO05D011144 8.6e-19 96.7 70 70.0
Carub.0001s4084 Capsella rubella HOM05D009023 ORTHO05D011144 4.7e-17 90.9 74 60.8
AT1G51915 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 6.8e-16 87.0 74 60.8
Aa31LG8G8060 Aethionema arabicum HOM05D009023 ORTHO05D011144 2.6e-15 85.1 74 56.8
AL1G59962 Arabidopsis lyrata HOM05D009023 ORTHO05D011144 7.5e-15 83.6 74 58.1
BraA05t20830Z Brassica rapa HOM05D009023 ORTHO05D011144 1.3e-14 82.8 65 69.2
BcaB04g19165 Brassica carinata HOM05D009023 ORTHO05D011144 6.3e-14 80.5 74 54.1
BolC3t17452H Brassica oleracea HOM05D009023 ORTHO05D011144 1.8e-13 79.0 77 53.2
BraA03t13375Z Brassica rapa HOM05D009023 ORTHO05D011144 7.0e-13 77.0 77 51.9
Thhalv10021873m.g Eutrema salsugineum HOM05D009023 ORTHO05D011144 9.2e-13 76.6 74 52.7
A03p42220 Brassica napus HOM05D009023 ORTHO05D011144 1.2e-12 76.3 72 55.6
CARHR097290 Cardamine hirsuta HOM05D009023 ORTHO05D011144 1.6e-12 75.9 74 54.1
CARHR097300 Cardamine hirsuta HOM05D009023 ORTHO05D011144 1.6e-12 75.9 74 54.1
AL3G35410 Arabidopsis lyrata HOM05D009023 ORTHO05D011144 4.6e-12 74.3 74 54.1
BcaB06g26232 Brassica carinata HOM05D009023 ORTHO05D011144 1.3e-11 72.8 74 48.6
C05p42100 Brassica napus HOM05D009023 ORTHO05D011144 1.3e-11 72.8 74 50.0
BolC5t32940H Brassica oleracea HOM05D009023 ORTHO05D011144 1.3e-11 72.8 74 50.0
BraA05t21614Z Brassica rapa HOM05D009023 ORTHO05D011144 1.3e-11 72.8 74 50.0
AT3G21352 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 2.3e-11 72.0 70 54.3
Carub.0003s2139 Capsella rubella HOM05D009023 ORTHO05D011144 3.3e-10 68.2 69 49.3
C03p51670 Brassica napus HOM05D009023 ORTHO05D011144 4.3e-10 67.8 74 47.3
BcaC05g28174 Brassica carinata HOM05D009023 ORTHO05D011144 2.1e-09 65.5 74 47.3
AL3G35420 Arabidopsis lyrata HOM05D009023 ORTHO05D011144 6.2e-09 63.9 63 52.4
AT3G21351 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 1.4e-08 62.8 74 47.3
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 1.7e-06 55.8 68 44.1
CARHR097280 Cardamine hirsuta HOM05D009023 ORTHO05D011144 4.9e-06 54.3 75 45.3


User provided reference genes

Program Settings