Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.4e-93 345.5 176 100.0
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.3e-62 243.4 169 78.7
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.3e-38 161.0 164 56.1
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.3e-35 152.9 169 55.6
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.4e-16 90.5 165 35.8
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 6.9e-16 88.2 165 35.8
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 9.0e-16 87.8 127 42.5
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 3.4e-15 85.9 127 41.7
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 7.6e-15 84.7 126 38.1
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.9e-13 80.1 132 37.1
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.2e-12 77.4 159 34.0
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 1.0e-11 74.3 139 36.0
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.3e-11 73.9 169 32.5
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.0e-11 72.8 157 32.5
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-11 72.8 112 38.4
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 3.0e-11 72.8 112 38.4
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.1e-10 70.9 161 31.7
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-10 69.7 111 38.7
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 3.3e-10 69.3 162 31.5
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.3e-10 69.3 145 36.6
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-09 67.4 130 40.0
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.6e-09 67.0 130 40.0
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 2.1e-09 66.6 164 32.9
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-09 66.6 129 34.1
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.1e-09 66.6 151 33.8
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-09 66.2 107 36.4
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-09 66.2 113 34.5
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.7e-09 65.9 147 30.6
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 6.2e-09 65.1 159 32.7
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 8.1e-09 64.7 158 30.4
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 8.1e-09 64.7 158 30.4
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 8.1e-09 64.7 163 30.7
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 8.1e-09 64.7 145 30.3
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-09 64.7 128 33.6
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 8.1e-09 64.7 145 30.3
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 8.1e-09 64.7 163 30.7
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 8.1e-09 64.7 162 34.6
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-08 64.3 151 34.4
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 1.8e-08 63.5 112 35.7
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.1e-08 62.8 134 32.8
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.0e-08 62.4 150 34.0
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 4.0e-08 62.4 163 30.1
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.3e-08 62.0 111 37.8
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 5.3e-08 62.0 116 34.5
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.9e-08 61.6 118 37.3
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.0e-08 61.2 118 37.3
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-07 60.8 117 35.0
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-07 60.5 114 33.3
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-07 60.5 111 33.3
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-07 60.1 120 34.2
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-07 60.1 116 34.5
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-07 59.7 156 34.6
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.4e-07 59.3 162 32.7
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 4.5e-07 58.9 116 37.1
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 5.8e-07 58.5 110 34.5
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.8e-07 58.5 140 34.3
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-06 56.6 110 35.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.2e-06 56.6 114 35.1
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.2e-06 56.6 87 39.1
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.2e-06 56.6 161 33.5
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.9e-06 56.2 163 34.4
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 6.4e-06 55.1 113 31.0
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 8.4e-06 54.7 111 32.4
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 8.4e-06 54.7 111 32.4
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 8.4e-06 54.7 81 39.5


User provided reference genes

Program Settings