Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 3.6e-250 867.8 458 100.0
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 3.1e-217 758.4 455 86.4
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 4.3e-203 711.4 454 82.2
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 1.0e-191 673.7 456 78.5
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 5.3e-177 624.8 470 70.6
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 1.2e-176 623.6 467 72.8
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 2.7e-165 585.9 469 69.3
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.2e-160 570.5 472 68.2
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.2e-160 570.5 472 68.2
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 6.5e-159 564.7 471 68.4
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 2.5e-158 562.8 459 69.1
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 4.8e-154 548.5 488 65.6
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 3.6e-133 479.2 467 58.0
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 4.2e-65 253.1 469 38.6
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 1.2e-64 251.5 480 38.5
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 3.6e-64 250.0 471 38.2
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 6.1e-64 249.2 469 39.9
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 2.8e-61 240.4 471 36.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.4e-60 238.0 462 38.1
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 5.3e-60 236.1 464 35.3
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 5.3e-60 236.1 486 38.3
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 2.5e-57 227.3 493 35.5
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 7.2e-57 225.7 488 34.8
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.5e-54 218.0 465 36.6
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 7.4e-54 215.7 457 36.3
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 9.7e-54 215.3 467 36.6
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.3e-53 214.9 467 36.0
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 4.8e-53 213.0 488 32.8
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 4.8e-53 213.0 490 32.9
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 6.3e-53 212.6 480 32.5
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.4e-52 210.7 489 34.6
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 4.1e-52 209.9 450 34.0
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 2.0e-51 207.6 438 37.4
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 2.6e-51 207.2 479 34.7
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 2.2e-50 204.1 456 34.4
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 5.0e-50 203.0 474 35.7
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 6.5e-50 202.6 458 35.6
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 2.3e-47 194.1 497 31.6
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 3.0e-47 193.7 458 36.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.0e-47 193.7 458 36.2
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 5.2e-47 193.0 461 29.3
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.1e-46 191.8 458 33.0
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 2.0e-46 191.0 468 34.4
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 5.7e-46 189.5 493 32.3
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 7.4e-46 189.1 464 34.5
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 9.7e-46 188.7 263 42.6
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 9.7e-46 188.7 453 33.1
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.3e-45 188.3 470 32.6
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 1.3e-45 188.3 503 32.6
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.3e-45 188.3 450 30.4
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 2.2e-45 187.6 464 33.8
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 4.8e-45 186.4 466 31.5
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 8.2e-45 185.7 452 33.2
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 1.1e-44 185.3 489 32.7
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 5.3e-44 183.0 409 35.0
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 7.0e-44 182.6 464 33.4
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.2e-43 181.8 460 32.0
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.2e-43 181.8 268 41.8
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.6e-43 181.4 460 35.4
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 1.6e-43 181.4 468 32.1
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 4.5e-43 179.9 464 31.2
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 5.9e-43 179.5 485 31.5
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.3e-42 178.3 459 29.8
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 6.5e-42 176.0 471 33.8
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.1e-41 175.3 472 30.5
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 3.2e-41 173.7 469 31.8
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 4.2e-41 173.3 460 30.9
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 9.4e-41 172.2 514 29.8
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.8e-39 167.9 248 40.7
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.8e-39 167.9 458 32.8
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 1.8e-39 167.9 290 39.0
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 1.8e-39 167.9 487 30.6
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 3.0e-39 167.2 459 30.3
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.2e-38 165.2 247 40.5
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.2e-38 165.2 465 31.8
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 4.4e-38 163.3 460 29.6
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 6.3e-37 159.5 242 39.7
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 4.1e-36 156.8 274 38.0
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.7e-35 154.1 481 30.8
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.3e-34 151.8 466 28.8
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 8.0e-32 142.5 220 40.5
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 7.5e-30 136.0 473 28.5
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 4.8e-29 133.3 171 45.0
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 4.1e-28 130.2 229 39.3
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 4.5e-27 126.7 224 36.6
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 5.9e-27 126.3 249 37.3
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 2.9e-26 124.0 248 35.1
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 5.5e-25 119.8 261 37.2
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 2.8e-24 117.5 350 31.4
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 3.6e-24 117.1 139 45.3
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 8.9e-23 112.5 200 37.5
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 2.6e-22 110.9 214 35.5
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 5.7e-22 109.8 188 35.6
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.4e-20 104.4 107 52.3
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 5.4e-20 103.2 212 34.0
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.7e-18 98.2 79 57.0
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 3.3e-17 94.0 466 26.0
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 6.1e-16 89.7 148 37.8
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 3.0e-15 87.4 202 32.7
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 5.2e-15 86.7 81 54.3
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.4e-12 78.6 184 31.0
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.4e-12 78.6 184 31.0
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.0e-11 74.7 126 37.3
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 7.8e-11 72.8 56 62.5
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 1.2e-08 65.5 67 46.3
Carub.0006s1097 Capsella rubella HOM05D000032 ORTHO05D114360 2.3e-07 61.2 45 62.2


User provided reference genes

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