Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 5.8e-179 630.9 361 100.0
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 5.3e-164 581.3 361 92.5
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 4.8e-141 505.0 376 81.4
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 7.7e-139 497.7 366 80.6
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.7e-133 479.9 381 78.0
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 4.8e-133 478.4 378 77.8
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.8e-124 449.9 356 75.8
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 4.5e-123 445.3 357 76.5
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 4.5e-123 445.3 357 76.5
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.0e-122 444.1 357 76.5
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.3e-121 439.1 359 75.5
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 4.7e-112 408.7 379 66.8
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 3.4e-110 402.5 341 73.9
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 9.6e-81 304.7 390 54.4
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 6.1e-51 205.7 381 41.7
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.0e-50 204.9 395 40.0
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 5.9e-46 189.1 392 41.6
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.0e-45 188.3 388 41.0
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 8.5e-45 185.3 381 42.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.1e-44 184.9 372 38.7
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.2e-43 181.4 388 39.2
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.2e-43 181.4 369 43.1
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.6e-43 181.0 403 37.0
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 3.9e-42 176.4 387 33.9
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.1e-41 174.9 329 37.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 2.0e-41 174.1 366 40.7
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.7e-40 169.9 384 37.0
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.1e-39 168.3 367 36.0
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 4.1e-39 166.4 308 38.3
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.3e-39 166.0 414 39.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.6e-38 163.7 378 39.9
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.4e-38 163.3 359 40.9
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 4.5e-38 162.9 356 41.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 5.9e-38 162.5 363 40.8
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 5.9e-38 162.5 361 41.3
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.9e-37 160.2 368 40.2
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.9e-37 160.2 390 38.2
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.8e-37 159.8 357 37.8
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.1e-36 158.3 370 40.8
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.2e-36 156.8 382 34.6
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 7.2e-36 155.6 391 38.9
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 9.4e-36 155.2 376 40.2
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.2e-35 154.8 382 34.6
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 2.1e-35 154.1 383 30.3
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 6.1e-35 152.5 369 34.1
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.8e-34 151.0 381 36.2
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 3.9e-34 149.8 372 37.4
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.9e-34 149.8 319 35.1
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 6.7e-34 149.1 362 41.2
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 6.7e-34 149.1 406 31.0
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-33 147.9 357 31.9
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-33 147.9 382 33.0
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 2.0e-33 147.5 373 32.2
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 5.7e-33 146.0 347 37.2
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.7e-33 146.0 382 33.5
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 4.8e-32 142.9 348 33.0
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.1e-31 141.7 349 40.4
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.8e-31 141.0 411 33.1
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 2.4e-31 140.6 384 34.6
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.1e-31 140.2 346 37.0
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 4.1e-31 139.8 388 34.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.6e-30 137.9 369 37.7
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.6e-30 137.1 276 35.1
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.5e-30 136.7 369 35.2
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 3.5e-30 136.7 416 33.9
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 7.7e-30 135.6 377 38.5
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.3e-29 134.8 374 35.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.7e-29 134.4 349 34.7
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 8.5e-29 132.1 289 36.0
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 8.5e-29 132.1 382 35.6
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.5e-28 131.3 363 38.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.9e-28 131.0 358 36.3
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.5e-28 130.6 362 35.1
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.2e-28 130.2 384 37.2
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 4.2e-28 129.8 425 32.5
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 5.5e-28 129.4 319 37.3
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 5.5e-28 129.4 405 33.1
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 1.2e-27 128.3 405 32.8
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.7e-27 127.1 388 33.0
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 6.1e-27 125.9 431 30.9
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.3e-26 124.0 379 30.9
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 4.0e-26 123.2 365 37.8
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 4.0e-26 123.2 405 31.4
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 8.8e-26 122.1 291 34.7
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.2e-25 121.7 361 35.2
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.5e-25 121.3 392 33.2
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 2.0e-25 120.9 249 35.3
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 2.6e-25 120.6 370 34.3
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 7.5e-25 119.0 358 35.2
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.7e-24 117.9 312 38.1
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 3.7e-24 116.7 371 32.9
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 4.8e-24 116.3 307 40.7
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 6.3e-24 115.9 370 35.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 8.2e-24 115.5 319 35.1
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.1e-23 113.2 366 30.9
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 5.3e-23 112.8 323 33.7
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 9.1e-23 112.1 359 36.5
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 2.0e-22 110.9 362 33.7
BolC3t19970H Brassica oleracea HOM05D005773 ORTHO05D006930 4.5e-22 109.8 204 43.6
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 4.5e-22 109.8 367 36.0
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.0e-21 108.6 250 41.2
BcaC01g00240 Brassica carinata HOM05D005773 ORTHO05D006930 1.1e-20 105.1 154 48.1
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.5e-20 104.8 361 34.9
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 2.5e-20 104.0 234 31.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.5e-20 104.0 364 33.2
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.2e-20 103.2 354 34.5
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-19 100.5 183 33.9
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 4.0e-18 96.7 71 67.6
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 4.0e-18 96.7 89 55.1
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 5.2e-18 96.3 431 26.0
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.5e-17 94.7 360 32.8
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.0e-17 94.4 322 34.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 4.8e-16 89.7 349 33.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.4e-15 87.4 213 31.9
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 2.0e-14 84.3 150 40.7
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.7e-14 84.0 87 48.3
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.8e-10 71.2 158 39.2
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.8e-10 71.2 70 58.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.8e-10 71.2 347 31.1
BcaB08g34443 Brassica carinata HOM05D005773 ORTHO05D006930 4.0e-10 70.1 64 59.4
BcaB05g23126 Brassica carinata HOM05D005773 ORTHO05D006930 2.0e-09 67.8 98 46.9
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.0e-09 67.8 348 31.6
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 7.5e-09 65.9 90 47.8
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.7e-08 64.7 56 55.4
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.8e-07 61.2 79 51.9
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 7.0e-07 59.3 76 51.3
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 9.2e-07 58.9 45 62.2
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.6e-06 58.2 87 37.9
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 2.0e-06 57.8 92 35.9
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 7.8e-06 55.8 97 35.1


User provided reference genes

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