Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 6.8e-110 400.6 190 100.0
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 2.4e-99 365.5 195 89.2
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.6e-93 345.5 194 85.6
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 2.2e-84 315.8 194 78.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.9e-84 315.5 195 78.5
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.9e-84 315.5 195 78.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 3.9e-81 305.1 200 75.5
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 4.7e-79 298.1 196 74.0
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 8.1e-79 297.4 195 74.4
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 4.0e-78 295.0 195 73.8
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 2.2e-76 289.3 200 71.5
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 3.4e-69 265.4 195 68.2
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 6.0e-66 254.6 208 63.9
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.3e-55 220.3 196 57.7
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.3e-36 157.1 199 44.7
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.9e-36 156.0 199 44.2
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.8e-36 155.6 199 44.2
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 7.9e-34 147.9 193 46.1
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 7.9e-34 147.9 193 46.1
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 1.0e-33 147.5 198 42.4
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.3e-33 146.4 202 43.6
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.5e-32 143.7 193 44.6
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 7.4e-32 141.4 184 43.5
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.1e-31 139.8 197 42.6
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.7e-31 139.0 204 44.1
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 6.3e-31 138.3 161 47.8
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.4e-30 137.1 206 41.3
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.4e-30 137.1 200 43.5
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.0e-29 133.3 200 43.0
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.9e-28 129.4 195 39.5
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 3.8e-28 129.0 169 43.2
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 2.5e-27 126.3 195 37.9
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.5e-27 126.3 200 42.0
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 2.5e-27 126.3 194 41.2
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 3.2e-27 125.9 196 41.3
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.2e-27 125.6 187 40.6
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 4.2e-27 125.6 189 39.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.5e-27 125.2 196 41.3
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.2e-27 124.8 187 40.1
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 9.3e-27 124.4 204 40.2
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.2e-26 124.0 194 40.2
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.6e-26 122.1 208 38.0
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 4.6e-26 122.1 199 39.2
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 6.1e-26 121.7 201 39.3
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 7.9e-26 121.3 199 39.2
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.3e-25 120.6 199 37.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.8e-25 120.2 194 37.1
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.8e-25 120.2 193 37.3
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.8e-25 120.2 197 40.1
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.3e-25 119.8 169 40.2
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.3e-25 119.8 198 36.9
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 3.0e-25 119.4 169 40.2
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 5.1e-25 118.6 200 36.5
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 6.7e-25 118.2 198 38.9
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 8.7e-25 117.9 201 42.3
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 8.7e-25 117.9 201 42.3
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.1e-24 117.5 170 40.6
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.1e-24 117.5 199 37.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.5e-24 117.1 208 35.6
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.5e-24 116.3 198 39.4
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 7.4e-24 114.8 204 36.8
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.7e-24 114.4 198 38.4
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.6e-23 113.6 200 37.5
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 3.7e-23 112.5 173 40.5
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 8.2e-23 111.3 197 36.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.1e-22 110.9 197 36.0
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.4e-22 110.5 197 36.0
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 2.4e-22 109.8 202 38.1
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 5.3e-22 108.6 193 37.3
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 5.3e-22 108.6 196 39.3
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 5.3e-22 108.6 200 40.0
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.2e-21 107.5 185 34.1
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 1.2e-21 107.5 201 34.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.5e-21 107.1 177 39.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.0e-21 106.7 195 35.9
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.9e-21 105.1 204 30.4
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 5.9e-21 105.1 165 40.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.0e-20 104.4 195 37.9
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 1.7e-20 103.6 163 37.4
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 2.9e-20 102.8 188 34.0
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.0e-20 102.1 99 51.5
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 5.0e-20 102.1 205 33.2
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 5.0e-20 102.1 177 39.0
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 5.0e-20 102.1 108 51.9
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.4e-19 100.5 187 34.8
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.4e-19 100.5 187 35.8
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.9e-19 100.1 187 35.8
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.5e-19 99.8 196 35.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 2.5e-19 99.8 201 35.3
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 5.5e-19 98.6 208 32.2
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 5.5e-19 98.6 208 33.2
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 7.2e-19 98.2 190 33.2
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 3.6e-18 95.9 170 35.3
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 6.1e-18 95.1 200 34.0
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.8e-17 93.6 194 32.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.3e-17 93.2 203 33.0
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 5.1e-17 92.0 181 35.9
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 5.1e-17 92.0 165 35.8
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 8.8e-17 91.3 155 37.4
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.1e-16 90.9 190 38.4
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.0e-16 90.1 196 34.2
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 3.3e-16 89.4 198 30.8
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.3e-16 89.4 173 34.1
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 7.4e-16 88.2 187 33.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 9.7e-16 87.8 194 36.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 4.8e-15 85.5 157 35.0
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 4.8e-15 85.5 202 32.7
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 1.5e-13 80.5 203 32.0
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 4.5e-13 79.0 95 45.3
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 4.5e-13 79.0 95 45.3
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 3.2e-11 72.8 69 59.4
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 5.5e-11 72.0 162 34.6
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 7.2e-11 71.6 69 58.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.6e-10 69.3 162 32.1
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 6.1e-10 68.6 183 32.8
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 2.3e-09 66.6 164 30.5
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.5e-08 63.9 146 31.5
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 2.2e-07 60.1 34 76.5
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.4e-06 57.4 77 35.1
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.1e-06 56.2 82 35.4
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.1e-06 56.2 53 50.9


User provided reference genes

Program Settings