Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G47395 Arabidopsis thaliana HOM05D009972 ORTHO05D012287 5.1e-20 100.1 51 100.0
AL1G53630 Arabidopsis lyrata HOM05D009972 ORTHO05D012287 5.2e-17 90.1 51 88.2
AL1G53640 Arabidopsis lyrata HOM05D009972 ORTHO05D012287 1.5e-16 88.6 51 88.2
Carub.0001s3619 Capsella rubella HOM05D009972 ORTHO05D012287 3.4e-16 87.4 51 90.2
Carub.0001s3617 Capsella rubella HOM05D009972 ORTHO05D012287 6.4e-15 83.2 51 86.3
AL1G53650 Arabidopsis lyrata HOM05D009972 ORTHO05D012287 8.4e-15 82.8 51 84.3
CARHR036960 Cardamine hirsuta HOM05D009972 ORTHO05D012287 1.1e-14 82.4 51 80.4
AT1G47400 Arabidopsis thaliana HOM05D009972 ORTHO05D012287 1.9e-14 81.6 51 82.4
CARHR036980 Cardamine hirsuta HOM05D009972 ORTHO05D012287 4.2e-14 80.5 50 84.0
Carub.0001s3620 Capsella rubella HOM05D009972 ORTHO05D012287 5.4e-14 80.1 51 80.4
Carub.0001s3618 Capsella rubella HOM05D009972 ORTHO05D012287 1.6e-13 78.6 50 82.0
BraA08t32568Z Brassica rapa HOM05D009972 ORTHO05D012287 2.1e-10 68.2 50 72.0
A08p05650 Brassica napus HOM05D009972 ORTHO05D012287 8.1e-10 66.2 49 71.4
A05p21330 Brassica napus HOM05D009972 ORTHO05D012287 1.1e-09 65.9 50 68.0
BraA05t21041Z Brassica rapa HOM05D009972 ORTHO05D012287 1.1e-09 65.9 50 68.0
BcaB04g17526 Brassica carinata HOM05D009972 ORTHO05D012287 3.1e-09 64.3 40 80.0
BcaC05g27603 Brassica carinata HOM05D009972 ORTHO05D012287 6.9e-09 63.2 50 66.0
C05p35910 Brassica napus HOM05D009972 ORTHO05D012287 6.9e-09 63.2 50 66.0
BolC5t32310H Brassica oleracea HOM05D009972 ORTHO05D012287 6.9e-09 63.2 50 66.0
A08p05670 Brassica napus HOM05D009972 ORTHO05D101090 7.6e-08 59.7 46 63.0
BolC8t47478H Brassica oleracea HOM05D009972 ORTHO05D012287 2.9e-07 57.8 50 66.0
C08p06320 Brassica napus HOM05D009972 ORTHO05D012287 6.4e-07 56.6 50 66.0
BraA08t32572Z Brassica rapa HOM05D009972 ORTHO05D033420 1.1e-06 55.8 44 63.6
C08p06340 Brassica napus HOM05D009972 ORTHO05D033420 3.2e-06 54.3 44 61.4
BolC8t47481H Brassica oleracea HOM05D009972 ORTHO05D033420 3.2e-06 54.3 44 61.4


User provided reference genes

Program Settings