Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.0e-141 505.8 259 100.0
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 1.8e-129 466.1 258 93.4
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.4e-118 429.9 260 87.7
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 2.4e-110 402.5 261 83.9
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.0e-108 397.1 258 81.8
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 7.3e-107 391.0 257 80.9
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 2.8e-106 389.0 259 80.3
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.5e-104 383.3 258 79.1
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.6e-101 373.2 277 74.4
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 7.8e-101 370.9 250 79.2
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.6e-98 363.2 259 75.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 1.1e-97 360.5 274 73.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 6.8e-97 357.8 274 71.9
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 4.7e-90 335.1 288 65.3
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 2.6e-80 302.8 267 58.4
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 5.8e-80 301.6 222 70.7
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.8e-80 301.6 269 57.6
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 9.9e-80 300.8 256 62.1
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.3e-79 300.4 263 59.3
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 2.2e-79 299.7 270 58.5
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 2.9e-79 299.3 263 60.1
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 4.9e-79 298.5 251 63.7
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 5.4e-78 295.0 260 61.9
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 5.4e-78 295.0 259 59.8
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.1e-77 293.1 226 68.1
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.7e-77 292.7 270 59.3
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 6.0e-77 291.6 259 59.1
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.3e-76 290.4 271 57.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 2.3e-76 289.7 186 76.9
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 1.9e-75 286.6 211 66.8
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 8.1e-74 281.2 256 59.8
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.1e-73 280.8 258 59.7
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 4.0e-73 278.9 281 57.3
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 9.0e-73 277.7 249 58.2
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.5e-72 276.9 285 56.1
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 2.0e-72 276.6 225 62.2
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 2.6e-72 276.2 258 59.3
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 5.8e-72 275.0 275 55.3
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.3e-71 273.9 270 56.7
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 8.4e-71 271.2 246 58.5
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.1e-70 270.8 260 60.0
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.4e-70 270.4 198 68.7
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 5.5e-70 268.5 261 55.2
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 7.1e-70 268.1 181 72.9
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.6e-69 266.9 227 64.3
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 2.1e-69 266.5 261 56.7
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 2.1e-69 266.5 204 66.2
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.1e-69 266.5 269 55.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 7.9e-69 264.6 204 65.7
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 7.9e-69 264.6 264 54.2
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 3.0e-68 262.7 226 60.6
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 5.1e-68 261.9 277 54.5
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 5.1e-68 261.9 238 58.4
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 5.1e-68 261.9 190 68.4
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 8.7e-68 261.2 251 59.0
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.7e-68 261.2 264 56.4
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 1.5e-67 260.4 186 68.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.9e-67 260.0 250 57.2
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.9e-67 260.0 247 57.1
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 3.3e-67 259.2 181 70.7
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 5.6e-67 258.5 275 54.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.4e-67 258.1 203 66.0
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 7.4e-67 258.1 181 68.5
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.3e-66 257.3 238 60.5
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 1.6e-66 256.9 231 61.0
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 1.6e-66 256.9 173 74.6
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.8e-66 256.1 269 53.2
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 4.8e-66 255.4 274 52.9
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 8.2e-66 254.6 246 56.5
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 3.1e-65 252.7 223 58.3
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 4.0e-65 252.3 220 59.5
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.2e-64 250.8 269 52.4
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.5e-64 250.4 179 68.7
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.5e-64 250.4 250 55.2
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 2.0e-64 250.0 243 56.8
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 1.0e-63 247.7 232 58.2
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.0e-63 247.7 258 53.9
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.3e-63 247.3 254 54.3
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 2.2e-63 246.5 233 57.9
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 5.5e-62 241.9 249 52.6
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.2e-61 240.7 188 63.3
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 7.9e-61 238.0 265 51.3
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.3e-60 237.3 241 55.2
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 6.7e-60 235.0 225 54.7
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 6.7e-60 235.0 259 49.8
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 2.5e-59 233.0 183 65.0
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 3.7e-58 229.2 268 48.5
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 4.8e-58 228.8 220 55.5
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.4e-57 226.5 268 48.1
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.0e-56 223.4 178 63.5
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 1.4e-54 217.2 316 43.0
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 1.5e-51 207.2 197 55.3
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 1.1e-49 201.1 173 60.1
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 3.1e-49 199.5 138 67.4
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 1.9e-46 190.3 184 51.1
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 2.5e-46 189.9 195 50.8
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 3.6e-45 186.0 129 72.9
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 3.0e-44 183.0 209 50.2
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.9e-44 182.6 249 43.4
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.1e-43 181.0 187 55.1
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 1.5e-40 170.6 187 55.6
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-40 169.5 203 47.3
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 5.0e-31 139.0 161 50.9
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.5e-30 136.7 201 41.3
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.2e-30 136.0 84 77.4
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.6e-29 134.0 129 57.4
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 5.2e-28 129.0 92 66.3
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.6e-21 107.5 152 42.1
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 2.0e-19 100.5 76 59.2
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 4.2e-14 82.8 95 48.4
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.7e-10 70.9 42 81.0


User provided reference genes

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