Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G43005 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.7e-129 465.3 226 100.0
Carub.0001s4306 Capsella rubella HOM05D000171 ORTHO05D000101 5.5e-34 148.7 296 35.8
AT1G61060 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.8e-24 114.8 197 38.6
A01p28380 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-20 104.4 301 28.2
C01p35970 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-20 104.0 301 27.9
BolC1t03556H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-20 104.0 301 27.9
BraA01t02965Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-20 104.0 301 28.2
Carub.0001s4354 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-18 97.8 284 29.9
CARHR044660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-16 89.7 298 28.9
AT1G53550 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.8e-16 88.6 304 26.3
AL1G62140 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-15 87.8 95 49.5
AL1G62130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-15 86.3 304 25.3
BcaC09g49492 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-13 80.1 85 47.1
AL1G62110 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.0e-13 78.6 97 42.3
Thhalv10011975m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-12 77.8 84 47.6
AL2G15380 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.7e-12 76.6 273 25.3
CARHR030590 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.5e-12 75.9 189 29.6
Carub.0001s4275 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-11 74.3 101 40.6
Thhalv10012341m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-11 73.9 148 32.4
Carub.0001s4276 Capsella rubella HOM05D000171 ORTHO05D000101 6.5e-11 72.0 95 42.1
A05p13530 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-10 70.1 182 28.0
AL1G62120 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-09 67.8 87 41.4
AL1G45620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-09 66.2 233 27.0
Carub.0001s4309 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-09 66.2 220 28.2
Sp5g12630 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.0e-09 65.1 93 35.5
AL5G43600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-08 64.7 95 36.8
AL1G62500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-08 64.3 255 25.5
Aa31LG1G23370 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.8e-08 63.9 85 41.2
BcaC02g07931 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-08 63.5 106 27.4
A04p24910 Brassica napus HOM05D000171 ORTHO05D000101 2.3e-08 63.5 100 33.0
BraA04t18005Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-08 63.5 100 33.0
AL1G63830 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.0e-08 63.2 106 35.8
CARHR288800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-08 63.2 96 37.5
CARHR219450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.0e-08 62.8 95 35.8
Thhalv10009370m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-08 62.8 195 25.6
AT1G53360 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.2e-08 62.4 99 38.4
AT1G53815 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.2e-08 62.4 90 42.2
BcaB02g10437 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-08 62.4 106 34.9
A04p22560 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-08 62.4 100 29.0
BcaC02g07929 Brassica carinata HOM05D000171 ORTHO05D000101 6.8e-08 62.0 92 30.4
CARHR030410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-08 62.0 99 36.4
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.8e-08 62.0 107 33.6
Aa31LG11G6320 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.8e-08 61.6 94 33.0
BcaC02g07924 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-08 61.6 140 26.4
BcaC04g22265 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-08 61.6 106 41.5
C04p61900 Brassica napus HOM05D000171 ORTHO05D000101 8.8e-08 61.6 140 26.4
Aa31LG1G6300 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.2e-07 61.2 114 28.9
Carub.0001s4307 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-07 61.2 99 40.4
Thhalv10019461m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-07 61.2 92 35.9
BraA05t20785Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-07 60.8 93 33.3
C04p61820 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-07 60.5 92 29.3
BolC4t27665H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-07 60.5 92 29.3
BraA04t17914Z Brassica rapa HOM05D000171 ORTHO05D000101 2.0e-07 60.5 191 25.7
BcaB06g28549 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-07 60.1 105 33.3
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-07 60.1 128 33.6
C09p21460 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-07 60.1 106 40.6
Carub.0001s2950 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-07 59.7 95 34.7
Thhalv10019545m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-07 59.7 93 36.6
BcaB06g28423 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-07 59.3 163 27.6
BraA04t17801Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-07 59.3 95 27.4
AT3G61340 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.7e-07 58.9 95 32.6
BcaB06g28593 Brassica carinata HOM05D000171 ORTHO05D000101 5.7e-07 58.9 95 30.5
Thhalv10009437m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.7e-07 58.9 98 31.6
Thhalv10009603m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.7e-07 58.9 95 35.8
Aa31LG11G6130 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.5e-07 58.5 95 32.6
Aa31LG11G6190 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.5e-07 58.5 202 28.2
Aa31LG6G12130 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.5e-07 58.5 95 31.6
AT1G53790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.5e-07 58.5 97 33.0
A05p17940 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-07 58.5 92 37.0
C06p15250 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-07 58.5 92 37.0
BraA04t17990Z Brassica rapa HOM05D000171 ORTHO05D000101 7.5e-07 58.5 95 31.6
BraA05t20687Z Brassica rapa HOM05D000171 ORTHO05D000101 7.5e-07 58.5 92 37.0
AL1G45210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.8e-07 58.2 96 33.3
BcaC02g07953 Brassica carinata HOM05D000171 ORTHO05D000101 9.8e-07 58.2 92 30.4
C04p61570 Brassica napus HOM05D000171 ORTHO05D000101 9.8e-07 58.2 92 30.4
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 9.8e-07 58.2 89 37.1
Thhalv10012153m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.8e-07 58.2 270 23.0
BraA10t45104Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-06 57.8 110 35.5
A04p23910 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-06 57.4 162 25.9
A04p24670 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-06 57.4 92 31.5
Aa31LG6G10610 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.2e-06 57.0 94 34.0
AL1G62520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-06 57.0 88 34.1
A04p23920 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 57.0 164 27.4
C04p60550 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 57.0 164 27.4
BraA04t17916Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-06 57.0 164 27.4
BraA04t18002Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-06 57.0 95 28.4
Sp3g17210 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.2e-06 57.0 85 38.8
AL1G33630 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-06 56.6 90 33.3
AL1G46260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-06 56.6 91 31.9
AT1G55070 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.8e-06 56.6 89 38.2
AT5G42430 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.8e-06 56.6 92 32.6
C03p84110 Brassica napus HOM05D000171 ORTHO05D000101 2.8e-06 56.6 86 41.9
C04p60620 Brassica napus HOM05D000171 ORTHO05D000101 2.8e-06 56.6 164 27.4
C04p61700 Brassica napus HOM05D000171 ORTHO05D000101 2.8e-06 56.6 98 30.6
Aa31LG11G6230 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.7e-06 56.2 94 29.8
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-06 56.2 94 33.0
BcaC05g30252 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-06 56.2 106 33.0
A04p24680 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 56.2 92 30.4
C04p61720 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 56.2 98 30.6
BolC9t59874H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-06 56.2 115 35.7
Carub.0005s1324 Capsella rubella HOM05D000171 ORTHO05D000101 3.7e-06 56.2 210 25.2
CARHR036660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.7e-06 56.2 83 34.9
Thhalv10009304m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.7e-06 56.2 91 28.6
Aa31LG11G6290 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.9e-06 55.8 92 32.6
BcaC05g26537 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 55.8 94 34.0
A04p16910 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 55.8 103 31.1
BolC5t31311H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-06 55.8 94 34.0
BraA01t01331Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-06 55.8 97 35.1
BraA04t17323Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-06 55.8 103 31.1
Aa31LG6G10550 Aethionema arabicum HOM05D000171 ORTHO05D000101 6.3e-06 55.5 96 32.3
BcaB06g28668 Brassica carinata HOM05D000171 ORTHO05D000101 6.3e-06 55.5 95 29.5
BcaC05g26608 Brassica carinata HOM05D000171 ORTHO05D000101 6.3e-06 55.5 94 33.0
C03p23010 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-06 55.5 89 37.1
C05p25940 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-06 55.5 94 34.0
C05p26570 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-06 55.5 94 33.0
BolC3t14702H Brassica oleracea HOM05D000171 ORTHO05D000101 6.3e-06 55.5 89 37.1
BolC5t31377H Brassica oleracea HOM05D000171 ORTHO05D000101 6.3e-06 55.5 94 33.0
Carub.0001s3590 Capsella rubella HOM05D000171 ORTHO05D000101 6.3e-06 55.5 87 41.4
Carub.0005s1563 Capsella rubella HOM05D000171 ORTHO05D000101 6.3e-06 55.5 89 38.2
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-06 55.5 80 37.5
Aa31sc52G30 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.3e-06 55.1 98 31.6
AL5G38280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.3e-06 55.1 97 37.1
AL5G39160 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.3e-06 55.1 98 35.7
C05p02780 Brassica napus HOM05D000171 ORTHO05D000101 8.3e-06 55.1 93 34.4
BolC4t27641H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 55.1 95 30.5
BolC5t29060H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 55.1 93 34.4
BraA04t17987Z Brassica rapa HOM05D000171 ORTHO05D000101 8.3e-06 55.1 92 28.3
Carub.0001s4310 Capsella rubella HOM05D000171 ORTHO05D000101 8.3e-06 55.1 128 30.5
Thhalv10009523m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.3e-06 55.1 92 37.0


User provided reference genes

Program Settings