Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 9.8e-140 500.4 296 100.0
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.4e-117 426.8 307 84.4
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 3.1e-101 372.5 305 74.4
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 2.3e-88 329.7 301 63.5
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 6.7e-80 301.6 330 58.8
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.6e-78 297.0 320 60.3
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.3e-70 270.8 309 54.7
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.3e-70 270.8 309 54.7
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.3e-70 270.8 309 54.7
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 5.8e-68 261.9 303 55.8
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 2.9e-67 259.6 315 53.7
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 3.8e-67 259.2 303 55.4
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.6e-62 243.8 319 54.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 3.7e-46 189.5 347 45.5
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 9.7e-39 164.9 298 42.6
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 5.9e-36 155.6 287 41.5
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 5.9e-36 155.6 295 49.8
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.3e-35 154.5 296 40.2
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.3e-35 154.5 279 44.1
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.3e-35 154.5 279 43.7
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 3.6e-33 146.4 283 41.0
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.0e-33 145.2 288 40.3
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.0e-32 144.8 290 40.7
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.0e-32 144.8 317 37.2
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 1.4e-32 144.4 315 46.3
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.8e-32 144.1 292 46.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.0e-32 142.9 255 42.7
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 5.7e-31 139.0 269 52.4
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.7e-30 137.5 303 48.8
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.8e-30 136.7 302 37.7
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.8e-30 136.7 322 40.1
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 8.2e-30 135.2 322 39.8
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.2e-30 135.2 322 39.8
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 8.2e-30 135.2 277 49.8
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 1.4e-29 134.4 344 35.2
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.4e-29 134.4 300 36.7
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.4e-29 134.4 322 32.6
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.1e-29 132.9 322 32.9
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 4.1e-29 132.9 276 43.1
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 5.3e-29 132.5 292 45.9
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 7.0e-29 132.1 355 36.9
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.2e-28 131.3 292 39.4
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.6e-28 131.0 267 38.6
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.7e-28 130.2 249 45.8
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 2.7e-28 130.2 301 36.5
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 3.5e-28 129.8 290 38.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 5.9e-28 129.0 349 35.8
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 2.9e-27 126.7 295 38.0
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 3.8e-27 126.3 308 39.9
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 5.0e-27 125.9 255 38.0
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 5.0e-27 125.9 292 38.7
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 1.1e-26 124.8 287 42.2
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.1e-26 124.8 269 39.8
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 5.5e-26 122.5 302 43.4
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 7.2e-26 122.1 277 36.5
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 2.1e-25 120.6 275 37.1
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.1e-25 120.6 267 40.4
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 4.7e-25 119.4 294 43.5
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 1.8e-24 117.5 300 39.0
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 2.3e-24 117.1 292 34.9
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 4.0e-24 116.3 298 36.2
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 5.2e-24 115.9 271 36.2
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.2e-23 114.8 296 39.5
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.0e-23 114.0 257 39.7
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.0e-23 114.0 257 39.7
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 2.6e-23 113.6 298 37.2
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 3.4e-23 113.2 292 33.6
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 4.4e-23 112.8 159 46.5
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.4e-23 112.8 245 41.2
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 7.5e-23 112.1 334 38.0
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 9.8e-23 111.7 154 48.7
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.3e-22 111.3 158 46.2
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 1.3e-22 111.3 210 42.4
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.7e-22 110.9 156 51.9
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 3.7e-22 109.8 158 48.1
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 3.7e-22 109.8 291 34.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.3e-22 109.0 152 46.1
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 8.3e-22 108.6 302 34.1
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 8.3e-22 108.6 333 35.1
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 1.4e-21 107.8 278 34.5
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.8e-21 107.5 156 48.7
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 4.1e-21 106.3 94 63.8
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 7.0e-21 105.5 156 49.4
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.2e-20 104.8 272 36.0
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.2e-20 104.8 234 45.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.6e-20 104.4 89 64.0
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.6e-20 104.4 270 36.3
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.0e-20 104.0 235 47.7
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 2.7e-20 103.6 150 46.0
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 5.9e-20 102.4 159 45.3
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 2.3e-19 100.5 290 33.8
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 2.3e-19 100.5 221 51.1
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.3e-19 100.5 199 44.2
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 8.6e-19 98.6 233 37.8
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.5e-18 97.1 145 46.2
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 5.5e-18 95.9 87 62.1
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 7.2e-18 95.5 295 31.9
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 1.6e-17 94.4 185 41.1
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.8e-17 93.6 230 37.4
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 1.4e-16 91.3 110 53.6
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-16 90.9 178 39.9
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 3.0e-16 90.1 153 41.8
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 5.2e-16 89.4 231 40.7
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.8e-16 88.6 127 47.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 2.0e-15 87.4 302 28.8
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 3.4e-15 86.7 205 50.2
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.7e-15 85.9 90 58.9
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 8.3e-14 82.0 199 36.7
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 1.8e-13 80.9 226 36.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 5.4e-13 79.3 244 34.0
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.2e-12 78.2 246 33.3
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 3.5e-12 76.6 262 37.8
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.3e-11 74.7 225 34.7
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.3e-10 68.9 51 66.7
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 7.3e-10 68.9 73 57.5
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 5.2e-08 62.8 71 50.7
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.3e-06 58.2 42 69.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.3e-06 58.2 42 69.0
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.7e-06 56.6 61 52.5


User provided reference genes

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