Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 3.4e-62 241.5 124 100.0
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 1.3e-56 223.0 126 90.5
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 8.4e-53 210.3 129 88.4
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.5e-49 198.7 125 86.4
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 8.2e-48 193.7 106 88.7
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 5.9e-46 187.6 106 85.8
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 1.7e-45 186.0 118 78.8
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 1.7e-45 186.0 106 84.9
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 1.7e-45 186.0 106 84.9
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 2.2e-45 185.7 106 84.9
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 3.8e-45 184.9 136 72.8
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.1e-43 179.1 122 74.6
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 3.0e-34 148.7 139 61.2
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.8e-31 139.4 137 61.3
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 5.5e-28 127.9 128 59.4
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 8.0e-27 124.0 130 57.7
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 2.3e-26 122.5 132 58.3
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 2.3e-26 122.5 118 54.2
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.0e-26 122.1 122 56.6
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 4.0e-26 121.7 118 53.4
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 2.6e-25 119.0 132 57.6
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 2.6e-25 119.0 132 57.6
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 3.3e-25 118.6 125 56.8
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 4.4e-25 118.2 125 56.8
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 5.7e-25 117.9 104 59.6
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 5.7e-25 117.9 101 60.4
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 1.3e-24 116.7 135 54.8
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 2.2e-24 115.9 101 61.4
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.8e-24 115.5 101 59.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 2.8e-24 115.5 129 51.9
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 3.7e-24 115.2 132 55.3
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 3.7e-24 115.2 132 56.8
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 6.3e-24 114.4 101 63.4
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 8.2e-24 114.0 117 53.8
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 1.1e-23 113.6 132 56.1
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.4e-23 113.2 128 53.9
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 1.4e-23 113.2 128 53.9
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 4.1e-23 111.7 118 58.5
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 7.0e-23 110.9 107 54.2
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 1.3e-21 106.7 103 58.3
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 1.7e-21 106.3 132 50.0
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 2.9e-21 105.5 127 52.0
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 3.2e-20 102.1 132 50.8
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 5.5e-20 101.3 126 47.6
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 7.2e-20 100.9 103 50.5
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 7.2e-20 100.9 129 51.9
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 1.2e-19 100.1 111 51.4
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 1.2e-19 100.1 110 51.8
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 1.6e-19 99.8 125 50.4
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 3.6e-19 98.6 102 49.0
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 6.1e-19 97.8 107 50.5
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 1.8e-18 96.3 100 51.0
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 2.3e-18 95.9 99 52.5
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 4.0e-18 95.1 104 48.1
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 4.0e-18 95.1 110 50.9
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 8.8e-18 94.0 131 48.1
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 2.6e-17 92.4 100 53.0
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 3.4e-17 92.0 117 47.9
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 4.4e-17 91.7 99 50.5
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 1.3e-16 90.1 105 50.5
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 4.8e-16 88.2 110 48.2
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 6.3e-16 87.8 127 41.7
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.1e-15 87.0 100 48.0
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 3.5e-14 82.0 107 48.6
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 1.0e-13 80.5 112 42.0
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 1.0e-13 80.5 108 43.5
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 2.9e-13 79.0 80 51.2
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 1.9e-12 76.3 128 42.2
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 2.5e-12 75.9 100 42.0
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 1.2e-11 73.6 109 46.8
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 1.6e-11 73.2 79 53.2
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 2.1e-11 72.8 104 46.2
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.1e-11 72.8 109 45.9
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 2.1e-11 72.8 119 38.7
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 1.8e-10 69.7 92 48.9
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 2.3e-10 69.3 121 39.7
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 2.3e-10 69.3 79 49.4
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 1.5e-09 66.6 122 36.1
unitig_46.g17995 Utricularia gibba HOM05D007776 ORTHO05D009812 2.6e-09 65.9 91 37.4
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 8.3e-08 60.8 92 40.2
HanXRQChr05g0130261 Helianthus annuus HOM05D007776 ORTHO05D009812 4.1e-07 58.5 93 40.9
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 5.4e-07 58.2 41 63.4
unitig_747.g21557 Utricularia gibba HOM05D007776 ORTHO05D009812 5.4e-07 58.2 87 41.4
SalBow7G1484 Salvia bowleyana HOM05D007776 ORTHO05D009812 2.0e-06 56.2 88 45.5


User provided reference genes

Program Settings