Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35400 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 3.5e-80 301.6 158 100.0
AT1G35410 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 4.5e-59 231.5 147 85.7
AL1G50220 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 2.4e-44 182.6 235 51.9
AT1G34560 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 4.9e-29 131.7 180 46.1
Thhalv10001845m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 3.3e-25 119.0 212 40.1
AL1G50150 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 9.5e-25 117.5 244 40.2
Thhalv10001856m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 1.2e-24 117.1 240 40.8
AT1G35353 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 8.0e-24 114.4 200 47.5
AL1G50210 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.8e-23 111.3 249 37.3
AL1G50190 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 3.4e-22 109.0 253 37.2
A05p28690 Brassica napus HOM05D008252 ORTHO05D011960 5.8e-22 108.2 177 44.6
AT1G35365 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 3.7e-21 105.5 193 44.6
AL1G50170 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.4e-21 104.8 253 37.2
AT3G27900 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 9.2e-20 100.9 226 38.5
Carub.0001s3300 Capsella rubella HOM05D008252 ORTHO05D011960 1.6e-19 100.1 241 36.9
AL1G50110 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.0e-19 98.2 219 33.3
BolC5t33176H Brassica oleracea HOM05D001339 ORTHO05D003609 1.3e-18 97.1 235 36.2
AL1G50120 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.7e-18 96.7 109 53.2
C05p44090 Brassica napus HOM05D008252 ORTHO05D011960 5.0e-18 95.1 214 36.4
A05p29110 Brassica napus HOM05D008252 ORTHO05D011960 1.1e-17 94.0 227 36.6
BraA05t21794Z Brassica rapa HOM05D008252 ORTHO05D011960 8.1e-16 87.8 222 35.1
BcaC05g28344 Brassica carinata HOM05D008252 ORTHO05D011960 2.3e-15 86.3 188 36.2
BolC5t33132H Brassica oleracea HOM05D008252 ORTHO05D011960 4.0e-15 85.5 180 38.3
Carub.0001s3301 Capsella rubella HOM05D008252 ORTHO05D011960 4.0e-15 85.5 217 35.5
BcaC05g28373 Brassica carinata HOM05D008252 ORTHO05D011960 1.2e-14 84.0 194 35.6
C05p44520 Brassica napus HOM05D001339 ORTHO05D003609 2.6e-14 82.8 248 32.3
Carub.0001s3298 Capsella rubella HOM05D008252 ORTHO05D011960 1.3e-13 80.5 235 32.3
AL2G10340 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 9.2e-12 74.3 210 31.0
BcaC03g18231 Brassica carinata HOM05D008252 ORTHO05D011866 3.5e-11 72.4 105 45.7
BolC2t12374H Brassica oleracea HOM05D008252 ORTHO05D011866 3.5e-11 72.4 105 45.7
A02p43040 Brassica napus HOM05D008252 ORTHO05D011866 3.0e-10 69.3 173 32.9
Thhalv10023974m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 1.5e-09 67.0 194 29.9
Carub.0004s2077 Capsella rubella HOM05D008252 ORTHO05D011866 9.5e-09 64.3 76 48.7
Carub.0001s3259 Capsella rubella HOM05D008252 ORTHO05D011960 4.7e-08 62.0 88 40.9
Thhalv10024117m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 6.2e-08 61.6 63 55.6
CARHR292080 Cardamine hirsuta HOM05D008252 ORTHO05D011866 2.3e-07 59.7 188 32.4
CARHR052650 Cardamine hirsuta HOM05D008252 ORTHO05D011866 3.1e-07 59.3 73 50.7
AL3G29480 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 1.2e-06 57.4 168 29.2
Sp1g31080 Schrenkiella parvula HOM05D008252 ORTHO05D011866 1.5e-06 57.0 208 28.4
BcaC03g17048 Brassica carinata HOM05D008252 ORTHO05D011866 2.0e-06 56.6 83 39.8
A02p32120 Brassica napus HOM05D008252 ORTHO05D011866 2.0e-06 56.6 83 39.8
C02p49660 Brassica napus HOM05D008252 ORTHO05D011866 2.0e-06 56.6 83 39.8
BraA02t08226Z Brassica rapa HOM05D008252 ORTHO05D011866 2.0e-06 56.6 83 39.8
BolC4t28412H Brassica oleracea HOM05D008252 ORTHO05D016722 3.4e-06 55.8 166 30.1
C02p63000 Brassica napus HOM05D008252 ORTHO05D011866 5.8e-06 55.1 196 29.6
BcaB07g30392 Brassica carinata HOM05D008252 ORTHO05D011866 7.6e-06 54.7 83 38.6


User provided reference genes

Program Settings