Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35365 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 2.6e-95 352.1 180 100.0
AL1G50170 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 7.9e-60 234.2 252 56.3
AL1G50190 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.2e-44 183.7 250 48.8
AL1G50210 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.1e-44 181.4 246 48.4
AL1G50150 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.7e-38 163.3 256 45.7
AT1G35353 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 5.5e-37 158.3 210 52.9
AL1G50110 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.8e-35 151.4 248 42.3
Carub.0001s3300 Capsella rubella HOM05D008252 ORTHO05D011960 7.5e-34 147.9 254 42.5
AL1G50220 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 6.3e-33 144.8 249 45.0
AT3G27900 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 6.3e-33 144.8 253 44.3
Thhalv10001856m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 8.6e-30 134.4 245 38.4
AL1G50120 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.9e-29 133.3 249 39.8
BolC5t33176H Brassica oleracea HOM05D001339 ORTHO05D003609 2.2e-25 119.8 243 39.9
Thhalv10001845m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 2.2e-25 119.8 221 40.3
A05p28690 Brassica napus HOM05D008252 ORTHO05D011960 1.8e-24 116.7 200 44.0
Carub.0001s3301 Capsella rubella HOM05D008252 ORTHO05D011960 2.0e-23 113.2 242 39.3
C05p44090 Brassica napus HOM05D008252 ORTHO05D011960 4.5e-23 112.1 232 39.2
AT1G34560 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 7.8e-23 111.3 190 43.7
AT1G35400 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 1.7e-22 110.2 193 44.6
Carub.0001s3298 Capsella rubella HOM05D008252 ORTHO05D011960 2.3e-22 109.8 244 36.1
C05p44520 Brassica napus HOM05D001339 ORTHO05D003609 1.9e-21 106.7 248 37.5
A05p29110 Brassica napus HOM05D008252 ORTHO05D011960 4.0e-19 99.0 239 35.6
AT1G35410 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 6.8e-19 98.2 166 45.2
BraA05t21794Z Brassica rapa HOM05D008252 ORTHO05D011960 6.8e-19 98.2 239 36.0
BolC5t33132H Brassica oleracea HOM05D008252 ORTHO05D011960 8.3e-17 91.3 193 38.3
BcaC05g28373 Brassica carinata HOM05D008252 ORTHO05D011960 1.4e-16 90.5 194 37.6
BcaC05g28344 Brassica carinata HOM05D008252 ORTHO05D011960 2.4e-16 89.7 193 36.8
Carub.0001s3259 Capsella rubella HOM05D008252 ORTHO05D011960 3.5e-15 85.9 197 36.5
BolC4t28412H Brassica oleracea HOM05D008252 ORTHO05D016722 1.2e-07 60.8 169 32.0
Carub.0004s2077 Capsella rubella HOM05D008252 ORTHO05D011866 4.6e-07 58.9 77 44.2
C03p26460 Brassica napus HOM05D008252 ORTHO05D011866 3.0e-06 56.2 220 26.4
Thhalv10023974m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 3.9e-06 55.8 163 29.4
AL2G10340 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 6.6e-06 55.1 88 40.9
A02p43040 Brassica napus HOM05D008252 ORTHO05D011866 6.6e-06 55.1 47 55.3


User provided reference genes

Program Settings