Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.4e-108 396.4 211 100.0
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 5.6e-105 384.4 211 96.7
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.1e-100 370.2 211 91.9
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 7.8e-99 364.0 211 90.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 3.9e-98 361.7 211 90.5
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 9.5e-97 357.1 211 88.6
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 2.1e-96 355.9 211 88.6
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 2.3e-95 352.4 211 87.7
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 2.3e-95 352.4 211 87.7
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 4.0e-95 351.7 211 87.7
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 5.2e-95 351.3 211 87.2
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.4e-76 289.3 212 70.8
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 7.6e-70 267.7 209 66.0
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.3e-69 266.9 209 64.6
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 9.3e-68 260.8 208 64.4
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.3e-66 256.1 206 63.6
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.9e-66 255.4 208 63.5
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 6.6e-66 254.6 209 62.7
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.9e-65 253.1 209 61.7
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.9e-65 253.1 208 61.5
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 2.5e-65 252.7 211 61.6
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 3.3e-65 252.3 207 62.8
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 9.6e-65 250.8 175 73.7
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 9.6e-65 250.8 209 62.7
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 3.6e-64 248.8 208 60.1
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 4.8e-64 248.4 211 60.2
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 8.1e-64 247.7 208 59.6
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.4e-63 246.9 211 60.2
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.4e-63 246.9 211 58.8
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 3.1e-63 245.7 208 60.6
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 3.1e-63 245.7 208 60.1
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 4.0e-63 245.4 208 60.1
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 6.9e-63 244.6 208 59.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.2e-62 243.8 208 60.1
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 1.5e-62 243.4 204 61.8
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.6e-62 242.7 208 59.1
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.6e-62 242.7 208 59.1
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.4e-62 242.3 208 59.1
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 5.8e-62 241.5 211 59.7
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 9.9e-62 240.7 209 58.9
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.3e-61 240.4 209 58.4
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.7e-61 240.0 211 58.8
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 2.9e-61 239.2 207 60.9
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 2.9e-61 239.2 221 56.6
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 7.1e-60 234.6 208 60.1
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 1.6e-59 233.4 215 59.1
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 2.7e-59 232.6 208 59.6
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 1.0e-58 230.7 209 57.9
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 5.1e-58 228.4 211 55.9
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 9.6e-57 224.2 205 60.5
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.6e-56 223.4 205 57.6
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.8e-56 221.9 205 59.0
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 6.9e-55 218.0 203 57.6
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 1.5e-54 216.9 208 55.3
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 2.5e-52 209.5 185 57.8
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 3.5e-51 205.7 197 55.3
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 2.8e-48 196.1 210 50.5
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.1e-47 194.1 209 50.2
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 2.6e-46 189.5 168 59.5
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.5e-41 173.7 206 48.1
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 4.5e-38 162.2 144 60.4
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 3.8e-37 159.1 209 42.1
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 1.7e-32 143.7 227 36.1
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 2.2e-29 133.3 125 56.8
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.1e-28 131.0 108 62.0
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 4.7e-27 125.6 64 96.9
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.6e-19 99.4 101 52.5
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 2.6e-17 93.2 60 75.0
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 4.8e-16 89.0 56 80.4
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.1e-15 87.8 60 68.3
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.8e-15 87.0 184 28.8
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 1.2e-09 67.8 147 34.0
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 2.2e-08 63.5 50 58.0
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 9.1e-07 58.2 223 23.8
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.5e-06 55.8 58 53.4


User provided reference genes

Program Settings