Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.2e-121 439.9 230 100.0
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.0e-112 410.2 232 93.1
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 1.1e-109 400.2 232 90.1
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 8.5e-107 390.6 232 87.5
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.6e-105 386.3 232 86.6
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.6e-105 386.3 232 87.5
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 7.9e-105 384.0 232 86.2
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 8.8e-104 380.6 230 86.5
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 1.5e-103 379.8 230 86.5
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 1.5e-103 379.8 230 86.5
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 1.3e-102 376.7 230 85.7
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 1.3e-102 376.7 230 85.7
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 3.7e-102 375.2 230 86.1
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 3.3e-95 352.1 228 78.9
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 2.8e-94 349.0 228 78.1
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 8.8e-88 327.4 233 74.2
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 8.8e-88 327.4 233 74.2
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 2.4e-85 319.3 232 72.0
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 1.6e-84 316.6 232 70.7
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 2.0e-84 316.2 232 71.1
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.9e-84 314.7 232 71.1
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 5.9e-84 314.7 232 71.1
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 7.7e-84 314.3 227 69.6
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 2.9e-83 312.4 233 70.4
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 2.9e-83 312.4 233 70.4
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 8.5e-83 310.8 233 70.0
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 8.5e-83 310.8 233 70.0
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 8.5e-83 310.8 233 70.0
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.2e-79 300.4 230 68.7
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 5.9e-76 288.1 217 67.7
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 2.2e-75 286.2 224 64.3
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 3.8e-75 285.4 201 73.6
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 5.0e-75 285.0 221 64.3
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.9e-74 283.1 229 62.0
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 2.5e-74 282.7 196 71.4
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 2.5e-74 282.7 221 62.9
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 2.1e-73 279.6 224 62.5
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 3.6e-73 278.9 228 63.2
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 6.1e-73 278.1 231 60.6
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 8.0e-73 277.7 226 60.6
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.0e-72 277.3 225 63.6
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 1.4e-72 276.9 226 60.2
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 1.4e-72 276.9 226 62.4
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 1.8e-72 276.6 224 61.6
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 1.8e-72 276.6 226 60.2
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 1.8e-72 276.6 229 62.4
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.8e-72 276.6 220 64.1
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 3.0e-72 275.8 226 62.4
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 3.0e-72 275.8 227 61.7
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 4.0e-72 275.4 227 61.2
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 4.0e-72 275.4 223 62.8
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 8.8e-72 274.2 228 59.2
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 1.2e-71 273.9 226 60.2
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 1.5e-71 273.5 220 62.7
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.5e-71 273.5 223 62.3
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.5e-71 273.5 223 62.3
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 2.0e-71 273.1 217 63.1
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 2.6e-71 272.7 211 65.4
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 2.6e-71 272.7 214 65.9
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 3.4e-71 272.3 222 59.9
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 3.4e-71 272.3 231 58.9
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 3.4e-71 272.3 226 62.4
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 3.4e-71 272.3 225 60.4
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 3.4e-71 272.3 217 62.2
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 5.7e-71 271.6 219 61.6
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 7.5e-71 271.2 224 62.5
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 7.5e-71 271.2 216 61.6
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 7.5e-71 271.2 223 61.9
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 9.8e-71 270.8 221 61.5
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 9.8e-71 270.8 223 61.9
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 9.8e-71 270.8 223 61.9
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 1.3e-70 270.4 218 62.4
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 1.7e-70 270.0 224 62.1
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.7e-70 270.0 222 61.3
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 2.2e-70 269.6 217 61.8
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 2.8e-70 269.2 216 63.0
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 4.8e-70 268.5 227 61.7
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 6.3e-70 268.1 232 57.8
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 8.3e-70 267.7 232 58.6
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 8.3e-70 267.7 228 59.6
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 8.3e-70 267.7 223 61.4
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 8.3e-70 267.7 228 58.3
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 1.8e-69 266.5 228 59.2
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 3.1e-69 265.8 216 61.1
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 5.4e-69 265.0 217 58.5
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 7.0e-69 264.6 211 62.6
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 1.2e-68 263.8 215 59.5
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 1.2e-68 263.8 223 59.2
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 1.2e-68 263.8 217 59.4
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 1.6e-68 263.5 217 59.9
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 2.7e-68 262.7 226 61.1
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 2.7e-68 262.7 217 59.0
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 2.7e-68 262.7 215 60.5
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 2.7e-68 262.7 225 58.7
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.5e-68 262.3 214 61.2
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 4.5e-68 261.9 226 60.2
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 5.9e-68 261.5 220 60.5
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 1.3e-67 260.4 223 58.3
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.3e-67 259.6 187 67.9
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 2.9e-67 259.2 216 59.3
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 6.6e-67 258.1 229 57.6
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 8.6e-67 257.7 215 60.9
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 2.1e-65 253.1 180 73.9
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 2.8e-65 252.7 208 63.0
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.6e-65 252.3 216 58.3
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 4.7e-65 251.9 221 55.7
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 8.0e-65 251.1 194 66.0
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 8.0e-65 251.1 254 53.5
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 8.0e-65 251.1 220 59.1
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 2.3e-64 249.6 194 60.3
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.3e-64 249.6 194 64.4
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.3e-64 249.6 194 64.4
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 4.0e-64 248.8 226 58.0
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 2.0e-63 246.5 223 53.4
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 2.0e-63 246.5 251 53.4
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 1.3e-62 243.8 224 60.7
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 2.8e-62 242.7 190 61.1
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 1.4e-61 240.4 222 52.7
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 1.2e-60 237.3 227 53.7
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 2.0e-60 236.5 182 64.3
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 3.5e-60 235.7 195 60.5
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 5.9e-60 235.0 243 52.3
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 7.8e-60 234.6 191 57.6
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 2.1e-57 226.5 210 56.2
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 1.8e-56 223.4 184 59.2
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 6.8e-56 221.5 221 50.7
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 6.4e-54 214.9 219 51.1
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 1.6e-52 210.3 208 52.9
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 1.3e-51 207.2 187 54.0
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 8.6e-51 204.5 161 60.9
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 2.5e-50 203.0 157 61.8
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 5.6e-50 201.8 208 48.1
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 2.1e-49 199.9 155 62.6
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 6.8e-48 194.9 148 64.9
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 3.4e-47 192.6 224 46.4
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 1.6e-44 183.7 173 56.1
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 2.3e-40 169.9 238 44.5
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 3.4e-39 166.0 211 41.7
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.3e-38 164.1 158 49.4
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 4.6e-36 155.6 208 40.4
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 6.0e-36 155.2 215 40.5
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.5e-34 150.6 217 40.1
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 9.5e-34 147.9 119 63.0
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 1.7e-30 137.1 121 56.2
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.9e-30 136.3 223 40.8
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 1.4e-29 134.0 183 39.3
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.2e-28 131.0 127 51.2
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 2.1e-28 130.2 121 52.1
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.9e-26 123.6 69 87.0
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 2.1e-25 120.2 89 65.2
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 4.4e-23 112.5 86 64.0
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 9.9e-23 111.3 147 38.1
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 2.2e-22 110.2 196 35.2
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 5.4e-13 79.0 153 35.3
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 5.4e-13 79.0 153 35.3
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 2.7e-12 76.6 67 64.2
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 3.5e-12 76.3 74 54.1
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 3.7e-09 66.2 62 45.2
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.1e-08 63.2 68 47.1


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