Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.2e-47 190.7 93 100.0
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-42 175.3 93 90.3
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.3e-41 171.0 93 88.2
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-41 170.6 93 88.2
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-41 170.6 93 88.2
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-41 170.6 93 88.2
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-41 170.6 93 88.2
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.1e-39 164.9 93 83.9
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-38 162.2 93 83.9
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-38 162.2 93 83.9
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-38 162.2 93 83.9
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-38 162.2 93 83.9
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.0e-34 148.3 90 78.9
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-33 145.6 93 77.4
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-33 145.6 93 77.4
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.5e-33 145.2 90 74.4
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.5e-17 92.8 87 46.0
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.5e-17 92.8 87 44.8
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.6e-17 90.9 87 46.0
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.6e-16 88.2 88 43.2
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.6e-16 88.2 84 48.8
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-16 87.8 88 43.2
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.2e-16 87.4 91 47.3
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 1.1e-15 86.7 92 48.9
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 8.9e-15 83.6 79 53.2
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.4e-14 81.3 75 49.3
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.8e-14 80.9 75 52.0
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 2.9e-13 78.6 79 50.6
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.1e-12 76.6 71 49.3
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 1.4e-12 76.3 85 43.5
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-12 76.3 88 37.5
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.1e-12 73.9 84 44.0
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.6e-11 72.8 96 46.9
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.7e-11 72.0 86 48.8
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 3.5e-11 71.6 89 39.3
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.5e-11 71.6 85 44.7
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.3e-10 68.9 68 45.6
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.3e-10 68.9 84 36.9
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.0e-10 68.6 86 40.7
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 3.9e-10 68.2 69 49.3
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.1e-10 67.8 87 42.5
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 6.6e-10 67.4 72 43.1
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-09 66.6 88 39.8
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.5e-09 66.2 70 44.3
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-09 66.2 71 45.1
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-09 66.2 71 45.1
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.9e-09 65.9 86 45.3
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 2.5e-09 65.5 78 43.6
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 2.5e-09 65.5 78 43.6
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 2.5e-09 65.5 79 44.3
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 3.3e-09 65.1 89 38.2
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-09 65.1 80 43.8
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 47.8
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 4.3e-09 64.7 67 46.3
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 5.6e-09 64.3 67 46.3
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 7.3e-09 63.9 65 44.6
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 9.6e-09 63.5 65 47.7
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.3e-08 63.2 67 47.8
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.3e-08 63.2 56 53.6
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.1e-08 62.4 55 50.9
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.8e-08 61.2 67 43.3
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.8e-08 61.2 55 50.9
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.1e-08 60.5 68 42.6
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 2.4e-07 58.9 65 47.7
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 2.4e-07 58.9 65 47.7
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.1e-07 58.5 81 42.0
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 3.1e-07 58.5 67 43.3
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-07 58.2 81 43.2
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 4.0e-07 58.2 65 47.7
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.3e-07 57.8 87 27.6
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.3e-07 57.8 59 45.8
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 6.9e-07 57.4 87 42.5
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 6.9e-07 57.4 87 42.5
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 1.2e-06 56.6 66 47.0
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 1.2e-06 56.6 80 41.2
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-06 55.8 91 34.1
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-06 55.8 91 34.1
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.6e-06 55.5 78 39.7
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 3.4e-06 55.1 47 51.1
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 3.4e-06 55.1 91 35.2
Thhalv10009517m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.4e-06 55.1 84 39.3
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.4e-06 55.1 60 46.7
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 5.8e-06 54.3 91 33.0
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 5.8e-06 54.3 62 46.8
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.9e-06 53.5 47 42.6
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 9.9e-06 53.5 81 37.0


User provided reference genes

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