Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.6e-50 200.3 93 100.0
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-46 188.7 93 94.6
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-46 188.7 93 94.6
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-46 188.7 93 94.6
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-46 188.7 93 94.6
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.6e-46 188.3 93 93.5
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-46 187.2 93 93.5
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-44 181.0 93 91.4
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-44 181.0 93 91.4
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-44 181.0 93 91.4
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-44 181.0 93 91.4
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-40 169.5 93 83.9
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.2e-39 164.1 93 84.9
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.2e-39 164.1 93 84.9
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-34 149.4 90 75.6
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-33 143.7 90 71.1
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.4e-20 100.9 87 48.3
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.4e-20 100.9 87 47.1
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.1e-20 100.5 90 47.8
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.2e-20 100.1 90 47.8
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.1e-19 99.0 87 48.3
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.5e-17 92.8 91 47.3
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.5e-17 92.0 84 47.6
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.2e-16 87.4 75 49.3
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.1e-16 87.0 88 42.0
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.1e-16 87.0 75 52.0
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 1.1e-15 86.7 90 48.9
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 1.4e-15 86.3 79 51.9
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 4.4e-14 81.3 79 49.4
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.8e-14 80.9 71 49.3
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 9.9e-14 80.1 89 40.4
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 8.4e-13 77.0 85 40.0
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.9e-12 75.9 68 47.1
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 2.4e-12 75.5 78 46.2
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 2.4e-12 75.5 78 46.2
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.4e-12 74.3 84 36.9
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 1.2e-11 73.2 69 47.8
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.6e-11 72.8 78 44.9
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-11 72.4 79 48.1
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 2.1e-11 72.4 74 40.5
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 71 45.1
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 4.6e-11 71.2 78 42.3
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.6e-11 71.2 70 45.7
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.6e-11 71.2 70 45.7
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 4.6e-11 71.2 71 43.7
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.6e-11 71.2 79 43.0
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.0e-11 70.9 80 47.5
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 6.0e-11 70.9 65 46.2
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 7.8e-11 70.5 67 46.3
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-10 70.1 67 44.8
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-10 69.7 67 44.8
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 2.3e-10 68.9 85 42.4
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 3.0e-10 68.6 67 46.3
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 5.1e-10 67.8 65 46.2
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.7e-10 67.0 86 39.5
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-09 66.6 80 46.2
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-09 66.6 87 40.2
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-09 66.2 71 45.1
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.5e-09 66.2 87 41.4
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.5e-09 65.5 86 39.5
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.5e-09 65.5 56 53.6
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-09 65.1 87 40.2
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-09 65.1 67 44.8
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 3.3e-09 65.1 59 49.2
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 3.3e-09 65.1 59 49.2
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-09 64.3 68 44.1
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 5.6e-09 64.3 59 49.2
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 71 43.7
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 7.3e-09 63.9 67 41.8
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-08 63.2 59 49.2
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.6e-08 62.8 87 31.0
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.8e-08 62.0 68 41.2
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 3.6e-08 61.6 47 53.2
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 3.6e-08 61.6 64 42.2
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 4.8e-08 61.2 77 42.9
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 4.8e-08 61.2 77 42.9
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 8.1e-08 60.5 59 45.8
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-07 60.1 44 50.0
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 1.8e-07 59.3 72 43.1
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 2.4e-07 58.9 71 38.0
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.1e-07 58.5 68 42.6
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 3.1e-07 58.5 55 47.3
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 3.1e-07 58.5 55 47.3
Carub.0001s2150 Capsella rubella HOM05D006717 ORTHO05D008139 3.1e-07 58.5 56 44.6
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.0e-07 58.2 63 39.7
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-06 56.6 68 41.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-06 56.6 68 41.2
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-06 56.2 68 41.2
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-06 55.8 72 34.7
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-06 55.8 72 34.7
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.6e-06 55.5 59 40.7
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 3.4e-06 55.1 71 35.2
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 5.8e-06 54.3 72 33.3


User provided reference genes

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