Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.5e-49 196.4 93 100.0
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-47 191.8 93 97.8
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-47 191.8 93 97.8
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-47 191.8 93 97.8
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-47 191.8 93 97.8
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.8e-47 190.3 93 96.8
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-45 186.0 93 93.5
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.3e-45 183.3 93 93.5
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.3e-45 183.3 93 93.5
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.3e-45 183.3 93 93.5
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.3e-45 183.3 93 93.5
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.6e-43 177.6 93 90.3
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.0e-40 166.8 93 87.1
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.0e-40 166.8 93 87.1
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-35 151.8 90 78.9
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.3e-33 144.4 90 73.3
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.4e-20 102.1 87 50.6
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.4e-20 102.1 87 49.4
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.2e-20 100.1 87 50.6
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.6e-19 99.4 88 48.9
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-19 99.0 88 48.9
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.1e-18 94.4 91 49.5
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.6e-18 93.6 84 50.0
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 2.1e-16 89.0 92 50.0
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.8e-16 88.6 75 52.0
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.6e-16 88.2 75 54.7
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 6.2e-16 87.4 79 54.4
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.2e-16 87.4 88 43.2
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 2.0e-14 82.4 79 51.9
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 2.6e-14 82.0 89 42.7
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.8e-14 80.9 71 50.7
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 8.4e-13 77.0 85 41.2
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 1.4e-12 76.3 78 47.4
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 1.4e-12 76.3 78 47.4
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.4e-12 75.5 68 47.1
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 5.4e-12 74.3 69 50.7
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.4e-12 74.3 78 46.2
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.1e-12 73.9 79 50.6
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.1e-12 73.9 84 36.9
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 9.3e-12 73.6 71 47.9
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 1.6e-11 72.8 72 44.4
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-11 72.8 71 46.5
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-11 72.4 80 50.0
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-11 72.0 70 45.7
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.7e-11 72.0 79 45.6
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.5e-11 71.6 70 45.7
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 3.5e-11 71.6 65 47.7
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 3.5e-11 71.6 67 47.8
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 4.6e-11 71.2 67 47.8
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 7.8e-11 70.5 78 42.3
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 7.8e-11 70.5 85 44.7
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.0e-10 70.1 67 49.3
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.7e-10 69.3 86 41.9
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 2.3e-10 68.9 65 49.2
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.9e-10 68.2 80 48.8
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.9e-10 68.2 87 43.7
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.1e-10 67.8 87 42.5
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.6e-10 67.4 71 46.5
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.7e-10 67.0 87 42.5
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.7e-10 67.0 86 41.9
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.1e-09 66.6 56 55.4
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-09 65.9 67 44.8
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 2.5e-09 65.5 65 50.8
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 2.5e-09 65.5 65 50.8
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 2.5e-09 65.5 67 44.8
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-09 65.1 71 45.1
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-09 65.1 68 44.1
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 4.3e-09 64.7 65 50.8
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 9.6e-09 63.5 58 51.7
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 1.6e-08 62.8 64 45.3
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.6e-08 62.8 87 32.2
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 2.1e-08 62.4 77 44.2
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 2.1e-08 62.4 77 44.2
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.8e-08 62.0 68 41.2
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 4.8e-08 61.2 47 53.2
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 6.2e-08 60.8 65 47.7
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.1e-08 60.5 47 46.8
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 8.1e-08 60.5 72 44.4
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-07 59.3 68 42.6
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 1.8e-07 59.3 55 49.1
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 1.8e-07 59.3 55 49.1
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 3.1e-07 58.5 71 38.0
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.3e-07 57.8 59 44.1
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.9e-07 57.4 68 41.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.9e-07 57.4 68 41.2
Carub.0001s2150 Capsella rubella HOM05D006717 ORTHO05D008139 6.9e-07 57.4 53 47.2
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.9e-07 57.4 63 39.7
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.0e-07 57.0 68 41.2
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 2.6e-06 55.5 72 36.1
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 2.6e-06 55.5 72 36.1
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 4.4e-06 54.7 71 36.6
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 7.6e-06 53.9 72 34.7


User provided reference genes

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