Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.2e-46 187.6 88 100.0
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.2e-46 187.6 88 100.0
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-43 179.1 93 93.5
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-43 179.1 93 93.5
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-43 179.1 93 93.5
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-43 179.1 93 93.5
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-41 172.2 93 89.2
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-41 172.2 93 89.2
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-41 172.2 93 89.2
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.8e-41 172.2 93 89.2
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.3e-41 170.6 93 88.2
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-39 166.0 93 87.1
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.2e-38 161.4 93 84.9
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.2e-34 147.1 93 77.4
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-29 131.7 90 70.0
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-28 129.8 90 66.7
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-16 89.7 88 46.6
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-15 86.3 87 43.7
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-15 86.3 87 42.5
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-15 86.3 88 44.3
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.0e-15 84.3 87 43.7
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.2e-14 81.3 90 41.1
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 9.4e-14 80.1 88 39.8
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.7e-13 78.6 91 44.0
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.8e-12 75.9 75 48.0
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.1e-12 74.3 75 45.3
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-11 72.4 78 50.0
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 2.5e-11 72.0 92 43.5
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.3e-11 71.2 78 50.0
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.7e-11 70.1 83 48.2
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 9.7e-11 70.1 79 45.6
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-10 69.7 67 44.8
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-10 69.7 67 44.8
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-10 69.3 85 36.5
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.7e-10 68.2 66 45.5
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.8e-10 67.8 71 45.1
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.3e-10 67.4 68 39.7
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-09 66.6 66 43.9
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 1.8e-09 65.9 78 42.3
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 1.8e-09 65.9 78 42.3
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 3.1e-09 65.1 65 43.1
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 3.1e-09 65.1 79 43.0
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 3.1e-09 65.1 91 35.2
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 4.1e-09 64.7 79 35.4
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.9e-09 63.9 80 41.2
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.2e-08 63.2 66 40.9
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 1.5e-08 62.8 65 41.5
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-08 62.8 71 42.3
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 2.0e-08 62.4 67 46.3
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.6e-08 62.0 68 42.6
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-08 62.0 75 40.0
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.6e-08 62.0 79 38.0
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 4.5e-08 61.2 82 41.5
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 4.5e-08 61.2 72 40.3
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-08 60.8 47 46.8
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.9e-08 60.8 57 52.6
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.7e-08 60.5 68 42.6
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.7e-08 60.5 65 46.2
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-07 60.1 63 46.0
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-07 60.1 71 40.8
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-07 60.1 63 46.0
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-07 59.3 54 51.9
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 2.2e-07 58.9 71 42.3
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 3.8e-07 58.2 85 40.0
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 3.8e-07 58.2 70 35.7
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 5.0e-07 57.8 47 51.1
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.5e-07 57.4 87 37.9
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.5e-07 57.4 85 36.5
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-06 56.6 65 41.5
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-06 56.2 87 29.9
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-06 56.2 88 39.8
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 1.9e-06 55.8 79 32.9
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 1.9e-06 55.8 61 41.0
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 3.2e-06 55.1 52 50.0
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 3.2e-06 55.1 52 50.0
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-06 55.1 52 50.0
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-06 55.1 72 37.5
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 9.4e-06 53.5 60 40.0


User provided reference genes

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