Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-48 194.1 93 100.0
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-48 194.1 93 100.0
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-48 194.1 93 100.0
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-48 194.1 93 100.0
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-46 187.2 93 95.7
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-46 187.2 93 95.7
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-46 187.2 93 95.7
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-46 187.2 93 95.7
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-45 185.7 93 94.6
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.1e-44 181.0 93 93.5
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.6e-43 177.6 93 93.5
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.6e-43 177.6 93 93.5
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-42 176.4 93 91.4
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-38 162.2 93 83.9
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 6.6e-34 147.1 90 76.7
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.5e-33 145.2 90 73.3
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.1e-20 101.3 87 49.4
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.1e-20 101.3 87 48.3
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-19 99.8 88 50.0
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.6e-19 99.4 87 49.4
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.6e-19 99.4 88 50.0
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.6e-18 93.6 91 49.5
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.5e-17 92.8 90 45.6
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.2e-16 89.7 88 43.2
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 4.7e-16 87.8 92 50.0
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 1.8e-15 85.9 79 53.2
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.4e-15 85.5 75 52.0
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.8e-15 84.0 75 49.3
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 5.8e-14 80.9 79 50.6
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 1.7e-13 79.3 91 40.7
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.9e-13 77.8 81 51.9
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 6.4e-13 77.4 84 42.9
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-12 76.6 81 51.9
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-12 76.3 71 47.9
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.4e-12 75.5 80 46.2
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-12 75.1 75 45.3
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 5.4e-12 74.3 69 52.2
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.4e-12 74.3 85 36.5
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 7.1e-12 73.9 72 45.8
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 43.7
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.3e-12 73.6 70 47.1
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.3e-12 73.6 70 47.1
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 9.3e-12 73.6 79 43.0
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 1.2e-11 73.2 71 46.5
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.6e-11 72.8 86 48.8
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-11 72.8 82 46.3
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 2.1e-11 72.4 85 45.9
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 2.7e-11 72.0 71 47.9
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 4.6e-11 71.2 78 46.2
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 4.6e-11 71.2 78 46.2
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.6e-11 71.2 57 57.9
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 7.8e-11 70.5 80 41.2
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-11 70.5 69 46.4
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 69 46.4
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 1.0e-10 70.1 67 49.3
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-10 70.1 67 49.3
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.3e-10 68.9 87 42.5
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 3.0e-10 68.6 65 46.2
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 5.1e-10 67.8 72 43.1
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 5.1e-10 67.8 72 43.1
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.1e-10 67.8 88 44.3
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.7e-10 67.0 69 43.5
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.9e-09 65.9 86 40.7
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 2.5e-09 65.5 58 53.4
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-09 65.1 59 49.2
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-09 64.3 71 45.1
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 7.3e-09 63.9 65 47.7
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.3e-08 63.2 87 32.2
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-08 62.4 71 43.7
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.1e-08 62.4 67 46.3
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.8e-08 62.0 56 50.0
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 2.8e-08 62.0 58 50.0
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 2.8e-08 62.0 58 50.0
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 2.8e-08 62.0 72 38.9
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 3.6e-08 61.6 55 50.9
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 3.6e-08 61.6 55 50.9
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 4.8e-08 61.2 58 50.0
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.2e-08 60.8 60 45.0
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.1e-08 60.5 47 46.8
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 8.1e-08 60.5 59 50.8
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 8.1e-08 60.5 59 50.8
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-07 60.1 68 42.6
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 1.4e-07 59.7 62 50.0
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-07 58.2 68 41.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-07 58.2 68 41.2
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.3e-07 57.8 68 41.2
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 5.3e-07 57.8 47 51.1
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 5.3e-07 57.8 64 43.8
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 6.9e-07 57.4 58 46.6
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.9e-07 57.4 57 49.1
Carub.0001s2150 Capsella rubella HOM05D006717 ORTHO05D008139 2.6e-06 55.5 53 47.2
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-06 55.1 72 37.5
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-06 55.1 72 37.5
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 3.4e-06 55.1 71 38.0
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 9.9e-06 53.5 72 36.1


User provided reference genes

Program Settings