Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-49 198.0 93 100.0
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-49 198.0 93 100.0
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-49 198.0 93 100.0
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-49 198.0 93 100.0
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.5e-49 196.4 93 98.9
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-47 191.8 93 97.8
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-46 189.5 93 95.7
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-46 189.5 93 95.7
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-46 189.5 93 95.7
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-46 189.5 93 95.7
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.8e-46 186.4 93 94.6
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-41 172.9 93 88.2
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-41 172.6 93 89.2
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-41 172.6 93 89.2
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-36 156.4 90 80.0
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.0e-35 150.6 90 75.6
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.9e-22 106.7 87 51.7
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.9e-22 106.7 87 50.6
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.7e-21 104.8 87 51.7
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.4e-21 103.6 88 50.0
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-20 103.2 88 50.0
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.7e-19 98.6 91 50.5
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-18 95.9 90 46.7
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 1.1e-17 93.2 92 51.1
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.1e-17 93.2 75 53.3
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.5e-17 92.8 75 56.0
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 2.5e-17 92.0 79 55.7
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.5e-17 92.0 88 44.3
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 8.1e-16 87.0 79 53.2
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.4e-15 85.5 71 52.1
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 5.8e-14 80.9 91 40.7
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 7.6e-14 80.5 84 44.0
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.3e-13 79.7 71 46.5
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.9e-13 77.8 79 46.8
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.4e-13 77.4 85 37.6
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.4e-13 77.0 81 50.6
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-12 76.6 75 45.3
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-12 75.9 81 50.6
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 1.9e-12 75.9 71 47.9
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 2.4e-12 75.5 82 46.3
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 2.4e-12 75.5 71 46.5
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.4e-12 75.5 80 46.2
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-12 75.1 71 46.5
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 4.2e-12 74.7 78 47.4
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 4.2e-12 74.7 78 47.4
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 4.2e-12 74.7 69 50.7
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 4.2e-12 74.7 85 45.9
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 7.1e-12 73.9 80 42.5
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 7.1e-12 73.9 71 47.9
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 1.6e-11 72.8 72 44.4
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-11 72.0 86 47.7
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-11 72.0 87 43.7
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-11 72.0 70 45.7
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 2.7e-11 72.0 65 47.7
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 2.7e-11 72.0 67 49.3
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.5e-11 71.6 70 45.7
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.5e-11 71.6 88 44.3
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.8e-11 70.5 89 42.7
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.8e-11 70.5 87 42.5
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.0e-10 70.1 57 56.1
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 1.7e-10 69.3 65 49.2
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 1.7e-10 69.3 71 43.7
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.7e-10 69.3 86 41.9
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-10 68.9 69 44.9
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.0e-10 68.6 69 44.9
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.6e-10 67.4 71 46.5
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 6.6e-10 67.4 87 33.3
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.5e-09 65.5 69 42.0
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 2.5e-09 65.5 58 51.7
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 2.5e-09 65.5 58 51.7
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-09 65.1 71 45.1
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 4.3e-09 64.7 58 51.7
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 9.6e-09 63.5 58 51.7
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-08 63.2 80 42.5
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 1.3e-08 63.2 64 45.3
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-08 63.2 80 42.5
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 2.8e-08 62.0 72 38.9
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 4.8e-08 61.2 47 53.2
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 6.2e-08 60.8 47 46.8
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 6.2e-08 60.8 58 48.3
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.2e-08 60.8 67 44.8
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 8.1e-08 60.5 79 41.8
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-07 59.7 68 42.6
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 1.4e-07 59.7 55 49.1
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 1.4e-07 59.7 55 49.1
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-07 59.7 60 43.3
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.3e-07 57.8 68 41.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.3e-07 57.8 68 41.2
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.9e-07 57.4 68 41.2
Carub.0001s2150 Capsella rubella HOM05D006717 ORTHO05D008139 6.9e-07 57.4 53 47.2
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.2e-06 56.6 57 47.4
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-06 55.1 72 36.1
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 3.4e-06 55.1 72 36.1
Thhalv10009517m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.4e-06 55.1 86 36.0
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 4.4e-06 54.7 71 36.6
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 9.9e-06 53.5 72 34.7


User provided reference genes

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